DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tbc1d22 and sgsm2

DIOPT Version :10

Sequence 1:NP_650941.3 Gene:Tbc1d22 / 42498 FlyBaseID:FBgn0038855 Length:546 Species:Drosophila melanogaster
Sequence 2:XP_068069810.1 Gene:sgsm2 / 799094 ZFINID:ZDB-GENE-131119-52 Length:1057 Species:Danio rerio


Alignment Length:462 Identity:88/462 - (19%)
Similarity:155/462 - (33%) Gaps:135/462 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly    67 KRELEKAAAVGVAVGRGAAPGSGMV------STFT-EYQKSVSDAWDMGDDEFCIISSTEAAAAA 124
            :||.|..:|:...:..|::..|.::      ||.: |...||.:....|.|..| ..||......
Zfish   675 QREKEMQSAIFAKLSSGSSIDSHVLRLIHRDSTISNEVFMSVDEPDAGGQDTSC-EDSTPTLTTV 738

  Fly   125 VGAGDAAHFSRQVSQTVALNVIETHSRSNQNHNASRSANESGADLVPVSSSSTDDCKEDRRSLPD 189
            |.....|...|.:   |..:..::...|::|::.:     ||...:   .||.|    |.:|:.:
Zfish   739 VTPAMLAPDERPL---VEFDSPDSGLPSSRNYSVA-----SGHSQI---MSSID----DGQSMEE 788

  Fly   190 SNENRSRLRNYPGR---------PQLQKISSNCQDSEYETKIEKFQVVLDSPQLDLVALKKISWS 245
            .......|....||         .||.|:::.............:.:.|    ||.|||      
Zfish   789 DTTPTGGLEEQGGRGSLSEDKLCSQLDKLTTTSSSEGTAPSFSSYTIEL----LDTVAL------ 843

  Fly   246 GVPRKMRAVSWRLLSKYLPPSSERRMAVLESKRQGYQDLRHNYFRVDSQDETQQDTYRQIHIDVP 310
                                                     |..|:|.              ||.
Zfish   844 -----------------------------------------NLHRIDK--------------DVQ 853

  Fly   311 RMNPQIPLFQQQLVQEMFERIL--FIWAIRHPASGYVQGINDLVTPFFIVFLQEALTPNTDLEKY 373
            |.:.....|....:::: ..|:  ::|  .|...|||||:.||:.|..::...|.|         
Zfish   854 RCDRNYYYFTSSNLEKL-RNIMCSYVW--EHLEIGYVQGMCDLLAPLMVILDDECL--------- 906

  Fly   374 DMSTLPEETRNIIEADSFWCLSKFLDCIQDNYIFAQLGIQE-KVNQLKDLIQRIDVNLHRHLQAH 437
                            ::.|.::.:..:..|  |...|..: ....::.|||.:|..|...:..:
Zfish   907 ----------------AYSCFTQLMRRMSQN--FPTGGAMDTHFANMRSLIQILDSELFELMHQN 953

  Fly   438 GVDYLQFSF--RWMNNLLTRELPLHCTIRLWDT-YLAESDGFALFHLYVCAAFLLHWKEQLMQQN 499
            | ||..|.|  ||......|||.......:|:. ::|.......|.|::..|.:..:::.::..|
Zfish   954 G-DYTHFYFCYRWFLLDFKRELLYEDVFAVWEVIWVAPRISSKHFVLFIALALVEVYRDIILDNN 1017

  Fly   500 -DFQGLM 505
             ||..::
Zfish  1018 MDFTDII 1024

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tbc1d22NP_650941.3 TBC 243..496 CDD:214540 44/258 (17%)
sgsm2XP_068069810.1 RUN 19..201 CDD:459241
PH_RUTBC 262..432 CDD:275431
TBC <845..1014 CDD:214540 43/213 (20%)
Blue background indicates that the domain is not in the aligned region.

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