DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Tbc1d22 and tbc1d2b

DIOPT Version :10

Sequence 1:NP_650941.3 Gene:Tbc1d22 / 42498 FlyBaseID:FBgn0038855 Length:546 Species:Drosophila melanogaster
Sequence 2:XP_012822167.2 Gene:tbc1d2b / 734055 XenbaseID:XB-GENE-5932742 Length:944 Species:Xenopus tropicalis


Alignment Length:338 Identity:72/338 - (21%)
Similarity:114/338 - (33%) Gaps:93/338 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly   214 QDSEYETKIEKFQVVLDSPQLDLVALKKIS----W-----------------------SGVPRKM 251
            :|.|.|.|:......||...|.|...::||    |                       :|:|.:.
 Frog   584 EDDEEEEKLVAKVRALDLKTLSLTENQEISNVVKWDNYFASTVNREMACSPELKALVRNGIPHEH 648

  Fly   252 RAVSWRLLSKYLPPSSERRMAVLESKR------QGY-QDLRHNYFRVDSQDETQQDTYRQIHIDV 309
            |:..|:..:.            |..|:      .|| |.|..|..      |.|....:||.:|:
 Frog   649 RSRMWKWFTN------------LHIKKLKDEAAPGYFQSLLQNAL------EKQNPASKQIELDL 695

  Fly   310 PRMNPQIPLFQQQLVQ--EMFERILFIWAIRHPASGYVQGINDLVTPFFIVFLQEALTPNTDLEK 372
            .|..|....:.....:  :....:|..::.|:|..||.||||.|.....:...||          
 Frog   696 MRTLPNNKHYTSPTSEGIQKLRNVLLAYSWRNPDIGYCQGINRLAAIALLYLDQE---------- 750

  Fly   373 YDMSTLPEETRNIIEADSFWCLSKFLDCI--QDNYIFAQLGIQEKVNQLKDLIQRIDVNLHRHLQ 435
                            |:||||...::..  :|.|....||.|......|||:......|..|.:
 Frog   751 ----------------DAFWCLVTIVEAFMPRDYYTKTLLGSQVDQRVFKDLMNEKLPRLCAHFE 799

  Fly   436 AHGVDYLQFSFRWMNNLLTRELPLHCTIRLWDTYLAESD----GFALFHLYVCAAFLLHWKEQLM 496
            .:.|||...:|.|...:....:......|:||:.|.|..    .|||       ....:.:|:::
 Frog   800 QYKVDYTLITFNWFLVVFVDSVVSDILFRIWDSLLYEGSKVIFRFAL-------GLFKYKEEEIL 857

  Fly   497 QQNDFQGLMLLLQ 509
            :..|...:...|:
 Frog   858 KLQDSMSIFKYLR 870

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tbc1d22NP_650941.3 TBC 243..496 CDD:214540 61/294 (21%)
tbc1d2bXP_012822167.2 PH_TBC1D2A 34..134 CDD:269966
Smc 322..>560 CDD:440809
TBC 640..857 CDD:214540 59/267 (22%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.