DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Tbc1d22 and Tbc1d8b

DIOPT Version :10

Sequence 1:NP_650941.3 Gene:Tbc1d22 / 42498 FlyBaseID:FBgn0038855 Length:546 Species:Drosophila melanogaster
Sequence 2:NP_001388066.1 Gene:Tbc1d8b / 315912 RGDID:1563084 Length:1118 Species:Rattus norvegicus


Alignment Length:535 Identity:107/535 - (20%)
Similarity:182/535 - (34%) Gaps:155/535 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly   104 AWDMGDDEFCIISSTEAAAAAVGAGDAAHFS--RQVSQTVALNVIETHSRSNQNHNASRSANESG 166
            |.|..||      |:.:...::....|..|:  :...|.||...::..:.|.|         :.|
  Rat   348 AVDKTDD------SSRSVIISIKGKTAFRFNEVKDFEQLVAKLRLKCRAASTQ---------DDG 397

  Fly   167 ADLVPVSSSST---DDCKEDRRSLPDS---------------NENRSRLRNYPGRPQLQKISSNC 213
            :..|.:||.||   ::.:|...:.|..               .:|...|.:...:.::::.|.|.
  Rat   398 STEVAISSDSTGLSENFEEQPLTFPKECSKTVNTEALMTVFHPQNLENLDSKMLKEKMKEQSWNI 462

  Fly   214 QDSEYETKIEKFQVVLDSPQLDLVALKKISWSGVPRKMRAVSWRLLSKYLPPSSERRMAVLESKR 278
            ..||....:..|:.   ....|||.      .|:|..:|...|.|.|     .:...||.    .
  Rat   463 LFSECGRGVSMFRT---KKTRDLVV------RGIPETLRGELWMLFS-----GAVNDMAA----N 509

  Fly   279 QGYQDLRHNYFRVDSQD-ETQQDTYRQIHIDVPRMNPQIPLFQQQLVQEMFERILFIWAIRHPAS 342
            .||      |..|..|. .|......:|..|:.|..|:.|.||.........|:|..:|.|:|..
  Rat   510 PGY------YAEVVEQSLGTSNLATEEIERDLRRSLPEHPAFQSDTGISALRRVLTAYAYRNPKI 568

  Fly   343 GYVQGINDLVTPFFIVFLQE-------------------------ALTPNTDLEKYDMSTLPEET 382
            ||.|.:| ::|...:::.:|                         ||......|:.....||:.|
  Rat   569 GYCQAMN-ILTSVLLLYAKEEEAFWLLVAVCERMLPDYFNRRIIGALVDQAVFEELIRDHLPQLT 632

  Fly   383 RNIIEADSF------WCLSKFLDCIQDNYIFAQLGIQEKVN--------QLKDLIQR----IDVN 429
            .::.:...|      |.|:.|:         :.|.|:..||        .:|.::|.    :|.|
  Rat   633 DHMTDMTFFSSVSLSWFLTLFI---------SVLPIESAVNVVDCFFYDGIKAILQLGLAILDYN 688

  Fly   430 LHRHL----QAHGVDYLQFSFRWMNNLLTRELPL----------------HCTIRLWDTYLAESD 474
            |.:.|    .|..|..|.   |:.:|::.::.||                |..:.:.|.....::
  Rat   689 LDKLLTCKDDAEAVTALN---RFFDNVINKDSPLPSNVQQGSNINDGKSNHAKVDITDLIRESNE 750

  Fly   475 GFAL-----FHLYVC--AAFLLHWKEQLMQQNDF----QGLMLLLQNLPTHNWSDRQINVLLAEA 528
            .:..     .|...|  ..:::...|:..:||..    |.:.:.||.|      |....:...|.
  Rat   751 KYGSIRYEDIHSMRCRNRLYVIQTLEETTKQNVLRVVSQDVKMSLQEL------DELYVIFKKEL 809

  Fly   529 FRLKFTYADAP--KH 541
            |...:.|...|  ||
  Rat   810 FISCYWYLSCPGLKH 824

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tbc1d22NP_650941.3 TBC 243..496 CDD:214540 64/323 (20%)
Tbc1d8bNP_001388066.1 PH-GRAM1_TBC1D8B 156..254 CDD:275419
PH-GRAM2_TBC1D8B 296..388 CDD:270159 10/45 (22%)
TBC 485..693 CDD:214540 51/232 (22%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.