DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tbc1d22 and Tbc1d9

DIOPT Version :10

Sequence 1:NP_650941.3 Gene:Tbc1d22 / 42498 FlyBaseID:FBgn0038855 Length:546 Species:Drosophila melanogaster
Sequence 2:NP_001402001.1 Gene:Tbc1d9 / 304645 RGDID:1308221 Length:1262 Species:Rattus norvegicus


Alignment Length:353 Identity:71/353 - (20%)
Similarity:125/353 - (35%) Gaps:122/353 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly   174 SSSTDDCKEDRRSLPDSNENRSRLRNYPG-RPQLQKISSNCQDSEYETKI--------EKFQVVL 229
            :||.|:......||..|:..||...:..| ||  ..::.|...:..:|.:        |:|    
  Rat   415 NSSDDEVYSRPSSLVSSSPQRSTSSDADGERP--FNLNGNSVPTATQTLMTMYRRRSPEEF---- 473

  Fly   230 DSPQLDLVALKKISW------------------------SGVPRKMRAVSWRLLSKYLPPSSERR 270
             :|:|....||:.:|                        .|:|.:||...|.|||.         
  Rat   474 -NPKLAKEFLKEQAWKIHFAEYGQGICMYRTEKTRELVLKGIPERMRGELWLLLSG--------- 528

  Fly   271 MAVLESKRQG--YQDL------RHNYFRVDSQDETQQDTYRQIHIDVPRMNPQIPLFQQQLVQEM 327
             |:.|.....  |:||      ::|.    :.:|.::|.:|.:        |:.|.||.::....
  Rat   529 -AINEKATHPGYYEDLVEKSMGKYNL----ATEEIERDLHRSL--------PEHPAFQNEMGIAA 580

  Fly   328 FERILFIWAIRHPASGYVQGINDLVTPFFIVFLQEALTPNTDLEKYDMSTLPEETRNIIEADSFW 392
            ..|:|..:|.|:|..||.|.:| :||...:::.:                         |.::||
  Rat   581 LRRVLTAYAFRNPNIGYCQAMN-IVTSVLLLYAK-------------------------EEEAFW 619

  Fly   393 CL-------------SKFLDCIQDNYIFAQLGIQEKVNQLKDLIQRIDVNLHRHLQAHGVDYLQF 444
            .|             ::.:..:.|..:|.:|. ::.|.||.|.:|.:.|            ....
  Rat   620 LLVALCERMLPDYYNTRVVGALVDQGVFEELA-RDYVPQLYDCMQDLGV------------ISTI 671

  Fly   445 SFRWMNNLLTRELPLHCTIRLWDTYLAE 472
            |..|...|....:|....:.:.|.:..|
  Rat   672 SLSWFLTLFLSVMPFESAVVVVDCFFYE 699

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tbc1d22NP_650941.3 TBC 243..496 CDD:214540 52/275 (19%)
Tbc1d9NP_001402001.1 PH-GRAM1_TCB1D9_TCB1D9B 157..255 CDD:275420
PH-GRAM2_TCB1D9_TCB1D9B 304..399 CDD:270161
TBC 510..720 CDD:214540 51/251 (20%)
EFh <891..921 CDD:415501
RRM_SF 944..1008 CDD:473069
Blue background indicates that the domain is not in the aligned region.

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