DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tbc1d22 and sgsm1a

DIOPT Version :10

Sequence 1:NP_650941.3 Gene:Tbc1d22 / 42498 FlyBaseID:FBgn0038855 Length:546 Species:Drosophila melanogaster
Sequence 2:XP_009299656.1 Gene:sgsm1a / 100270734 ZFINID:ZDB-GENE-060526-379 Length:1392 Species:Danio rerio


Alignment Length:422 Identity:91/422 - (21%)
Similarity:154/422 - (36%) Gaps:112/422 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly   119 EAAAAAVGAGDAAHFSRQVSQTVALNVIETHSRSNQNHNASRSANESGADLVPVSSSSTDDCKE- 182
            ||........|....:..|.:||.| |.|..|    |...|.:.:|:.:|    .|.|..:.:| 
Zfish  1035 EAGPTGKRKADMQRKAPVVEETVPL-VHEAFS----NRKMSEAQDETESD----ESPSAIEMEEI 1090

  Fly   183 ------DRRSLPDSNENRSRLRNYPGRPQLQ--------KISSNCQDSEYETKIEKFQVVLDSPQ 233
                  :|:|.|     :.|.......|.|:        |:||.      |...||.::....||
Zfish  1091 PTAKVWERKSSP-----KRRTTEQATIPALELRLEEAHGKLSSE------EVNPEKPEMESLCPQ 1144

  Fly   234 LDLVAL--KKISWSG-VPRKMRAVSWRLLSKYLPPSSERRMAVLESKRQGYQDLRHNYFRVDSQD 295
            ||.:|:  :||..|. |.......|..||..|                      ..|..|:|.  
Zfish  1145 LDSLAVNTEKIEASSPVSSIGTTYSQELLDMY----------------------TLNLHRIDK-- 1185

  Fly   296 ETQQDTYRQIHIDVPRMNPQIPLFQQQLVQEMFERIL--FIWAIRHPASGYVQGINDLVTPFFIV 358
                        ||.|.:.....|....:::: ..|:  ::|  :|...|||||:.||:.|..::
Zfish  1186 ------------DVQRCDRNYWYFTPANLEKL-RNIMCSYVW--QHLEIGYVQGMCDLLAPLLVI 1235

  Fly   359 FLQEALTPNTDLEKYDMSTLPEETRNIIEADSFWCLSKFLDCIQDNYIFAQLGIQE-KVNQLKDL 422
            ...||:                         :|.|.::.:..:..|  |...|..: ....::.|
Zfish  1236 LDDEAM-------------------------AFSCFTELMKRMNQN--FPHGGAMDTHFANMRSL 1273

  Fly   423 IQRIDVNLHRHLQAHGVDYLQFSF--RWMNNLLTRELPLHCTIRLWDT-YLAESDGFALFHLYVC 484
            ||.:|..|...:..:| ||..|.|  ||......|||.......:|:| :.|:....:.|.|::.
Zfish  1274 IQILDAELFELMHQNG-DYTHFYFCYRWFLLDFKRELVYDDVFAVWETIWAAKCVSSSHFVLFIA 1337

  Fly   485 AAFLLHWKEQLMQQN-DFQGLMLLLQNLPTHN 515
            .:.:..:::.:::.| ||..::.....:..|:
Zfish  1338 LSLVEIYRDIILENNMDFTDIIKFFNEMAEHH 1369

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tbc1d22NP_650941.3 TBC 243..496 CDD:214540 51/259 (20%)
sgsm1aXP_009299656.1 RUN 20..196 CDD:459241
PH_RUTBC 256..425 CDD:275431
PTZ00121 <862..>1110 CDD:173412 21/88 (24%)
TBC 1168..1349 CDD:214540 49/247 (20%)
Blue background indicates that the domain is not in the aligned region.

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