DRSC/TRiP Functional Genomics Resources

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Protein Alignment RhoGAP93B and RGD1

DIOPT Version :10

Sequence 1:NP_650939.2 Gene:RhoGAP93B / 42496 FlyBaseID:FBgn0038853 Length:1330 Species:Drosophila melanogaster
Sequence 2:NP_009819.1 Gene:RGD1 / 852563 SGDID:S000000464 Length:666 Species:Saccharomyces cerevisiae


Alignment Length:198 Identity:43/198 - (21%)
Similarity:86/198 - (43%) Gaps:35/198 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly  1133 FGNTLSEVMDLQKEKFPFRKLPWIQTTLSEHVLLLN--GKQTEGIFRVSADVDEVGCMKNRLDR- 1194
            ||..|..:::.:::..|        ..:.:.:.:::  |...|||:|.||:|.:|..:|..:|: 
Yeast   470 FGVPLESLIEFEQDMVP--------AIVRQCIYVIDKFGLDQEGIYRKSANVLDVSKLKEEIDKD 526

  Fly  1195 -----WDVPDYKNTLVDAHTPASLLKLWYRELYDPLIPDAYYED---CVNTEDPDKAKE----IV 1247
                 ..:|...::..|.:...||||.::..|.|.::|.|...:   |:..|||...|.    ::
Yeast   527 PANISMILPSKPHSDSDIYLVGSLLKTFFASLPDSVLPKALSSEIKVCLQIEDPTTRKNFMHGLI 591

  Fly  1248 NKLPEINQLVLTYLIHFLQQFAIPEVVSCTKMDSSNLAMVFAPNCLRCTSEDP----------KV 1302
            ..||:.....|..|:..|::....|..:  :|:...|.:::.|.......:|.          :|
Yeast   592 YNLPDAQYWTLRALVFHLKRVLAHEAQN--RMNLRALCIIWGPTIAPANPDDANDVNFQIMAMEV 654

  Fly  1303 ILE 1305
            :||
Yeast   655 LLE 657

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RhoGAP93BNP_650939.2 PRP40 1..>75 CDD:227435
PAT1 <737..>892 CDD:401645
MyTH4 1004..1122 CDD:459939
RhoGAP_KIAA1688 1133..1320 CDD:239854 43/198 (22%)
RGD1NP_009819.1 F-BAR_Rgd1 39..268 CDD:153336
RhoGAP_fRGD1 470..663 CDD:239863 43/198 (22%)
Blue background indicates that the domain is not in the aligned region.

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