DRSC/TRiP Functional Genomics Resources

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Protein Alignment RhoGAP93B and AT1G08340

DIOPT Version :10

Sequence 1:NP_650939.2 Gene:RhoGAP93B / 42496 FlyBaseID:FBgn0038853 Length:1330 Species:Drosophila melanogaster
Sequence 2:NP_172310.1 Gene:AT1G08340 / 837354 AraportID:AT1G08340 Length:331 Species:Arabidopsis thaliana


Alignment Length:234 Identity:69/234 - (29%)
Similarity:106/234 - (45%) Gaps:24/234 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly  1090 ISHYATVCCRRLDRIGSSGRRMAKKPTVDEVEQARQQILRNSMFGNTLSEVMDLQKEKFPFRKLP 1154
            |.|.|.|...|.|  |..|.....:|.|.....:...    ::|| ..:|.|.|..:. ....:|
plant     9 IRHVAHVTFDRFD--GFLGLPSEFEPDVPRK
APSASA----TVFG-VSTESMQLSYDS-RGNCVP 65

  Fly  1155 WIQTTLSEHVLLLNGKQTEGIFRVSADVDEVGCMKNRLDRWDVPDYKNTLVDAHTPASLLKLWYR 1219
            .|...|...:....|.|.||:||::.:..|...::.:|::..:||.    :|.|..|.|:|.|:|
plant    66 VILLLLQSRLYDQGGLQAEGVFRITGENSEEEFVREQLNKGIIPDG----IDVHCLAGLIKAWFR 126

  Fly  1220 EL----YDPLIPDAYYEDCVNTEDPDKAKEIVNKLPEINQLVLTYLIHFLQQFAIPEVVSCTKMD 1280
            ||    .||| |......|.:.||..|   :|..||:....:|.:.|:.:......|.|:  ||:
plant   127 ELPRGVLDPL-PSEQVMQCESDEDFVK---VVRLLPQTEASLLNWAINLMADVIQFEHVN--KMN 185

  Fly  1281 SSNLAMVFAPNCLRCTSEDPKVILENARKEMSFMRTLIQ 1319
            |.|||:|||||..:..  ||...|..|.:.|..:::|.:
plant   186 SRNLALVFAPNMSQMA--DPLTALMYAVQVMKLLKSLTE 222

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RhoGAP93BNP_650939.2 PRP40 1..>75 CDD:227435
PAT1 <737..>892 CDD:401645
MyTH4 1004..1122 CDD:459939 10/31 (32%)
RhoGAP_KIAA1688 1133..1320 CDD:239854 59/191 (31%)
AT1G08340NP_172310.1 PBD 3..37 CDD:197628 10/29 (34%)
RhoGAP 65..217 CDD:238090 53/163 (33%)
Blue background indicates that the domain is not in the aligned region.

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