DRSC/TRiP Functional Genomics Resources

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Protein Alignment RhoGAP93B and AT5G22400

DIOPT Version :10

Sequence 1:NP_650939.2 Gene:RhoGAP93B / 42496 FlyBaseID:FBgn0038853 Length:1330 Species:Drosophila melanogaster
Sequence 2:NP_197632.1 Gene:AT5G22400 / 832301 AraportID:AT5G22400 Length:466 Species:Arabidopsis thaliana


Alignment Length:314 Identity:85/314 - (27%)
Similarity:147/314 - (46%) Gaps:43/314 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly  1010 ASLPQQQLRDELYVQLCRQTTENPKRDSLIRGWE----LMAICLSYVPPSPTFQPTLLNYVNRHR 1070
            ||:.:|.||.       |.:|:..:.|.   |.|    |:|:.::      .|:.:|::..:..|
plant    62 ASIEEQDLRR-------RSSTDGGEEDD---GGEDQISLLALLVA------IFRRSLISCKSNRR 110

  Fly  1071 DPSFATCFMEVSKWPIHVQISHYATVCCRRLDRIGSSGRRMAKKPTVDEVEQARQQILRNSMFGN 1135
            :    .|.||:. ||.:|:  |.|.|...|.:  |..|..:..:|.|..    |......::|| 
plant   111 E----LCSMEIG-WPTNVR--HVAHVTFDRFN--GFLGLPVEFEPEVPR----RAPSASATVFG- 161

  Fly  1136 TLSEVMDLQKEKFPFRKLPWIQTTLSEHVLLLNGKQTEGIFRVSADVDEVGCMKNRLDRWDVPDY 1200
            ..:|.|.|..:. ....:|.|...:...:....|.|.|||||::|:..|...::.:|:|..:|: 
plant   162 VSTESMQLSYDS-RGNCVPTILLLMQNCLYSQGGLQAEGIFRLTAENSEEEAVREQLNRGFIPE- 224

  Fly  1201 KNTLVDAHTPASLLKLWYRELYDPLIPDAYYEDCVNTEDPDKAKEIVNKLPEINQLVLTYLIHFL 1265
               .:|.|..|.|:|.|:|||...::.....|..:..:..::..|:|..||.....:|.:.|:.:
plant   225 ---RIDVHCLAGLIKAWFRELPTSVLDSLSPEQVMQCQTEEENVELVRLLPPTEAALLDWAINLM 286

  Fly  1266 QQFAIPEVVSCTKMDSSNLAMVFAPNCLRCTSEDPKVILENARKEMSFMRTLIQ 1319
            ..  :.:.....||:|.|:|||||||..:  .:||...|..|.:.|:|::|||:
plant   287 AD--VVQYEHLNKMNSRNIAMVFAPNMTQ--MDDPLTALMYAVQVMNFLKTLIE 336

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RhoGAP93BNP_650939.2 PRP40 1..>75 CDD:227435
PAT1 <737..>892 CDD:401645
MyTH4 1004..1122 CDD:459939 29/115 (25%)
RhoGAP_KIAA1688 1133..1320 CDD:239854 55/187 (29%)
AT5G22400NP_197632.1 CRIB 115..155 CDD:238077 14/48 (29%)
RhoGAP 178..337 CDD:214618 50/167 (30%)
Blue background indicates that the domain is not in the aligned region.

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