DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment RhoGAP93B and AT4G03100

DIOPT Version :10

Sequence 1:NP_650939.2 Gene:RhoGAP93B / 42496 FlyBaseID:FBgn0038853 Length:1330 Species:Drosophila melanogaster
Sequence 2:NP_192219.2 Gene:AT4G03100 / 828092 AraportID:AT4G03100 Length:430 Species:Arabidopsis thaliana


Alignment Length:261 Identity:73/261 - (27%)
Similarity:121/261 - (46%) Gaps:31/261 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly  1067 NRHRDP------SFATCFMEVSKWPIHVQ-ISHYATVCCRRLDRI-GSSGRRMAKKPTVDEVE-Q 1122
            ||..|.      |.|...||:. ||.:|: |:|..      .||. |..|     .|...:|| .
plant    60 NRQDDGGVGGGISSAVHHMEIG-WPTNVRHITHVT------FDRFHGFLG-----LPHELQVEIP 112

  Fly  1123 ARQQILRNSMFGNTLSEVMDLQKEKFPFRKLPWIQTTLSEHVLLLNGKQTEGIFRVSADVDEVGC 1187
            .|......|:||.:...:.....||  ...:|.|...:.|.:....|.:.|||||::.:..:...
plant   113 CRVPSASVSVFGVSAESMQCSYDEK--GNSVPTILLLMQERLYSQQGLKAEGIFRINPENSQEEH 175

  Fly  1188 MKNRLDRWDVPDYKNTLVDAHTPASLLKLWYRELYDPLIPDAYYEDCVNTEDPDKAKEIVNKLPE 1252
            ::::|:|..||:.    :|.|..|.|:|.|:|||...::.....|:.:|....|::.|::.:|..
plant   176 VRDQLNRGIVPEN----IDVHCLAGLIKAWFRELPSGVLDGLSPEEVLNCNTEDESVELIKQLKP 236

  Fly  1253 INQLVLTYLIHFLQQFAIPEVVSCTKMDSSNLAMVFAPNCLRCTSEDPKVILENARKEMSFMRTL 1317
            ....:|.:.:..:..  :.|.....||::.|:|||||||..:.|  ||...|.:|.:.|:.::||
plant   237 TESALLNWAVDLMAD--VVEEEESNKMNARNIAMVFAPNMTQMT--DPLTALMHAVQVMNLLKTL 297

  Fly  1318 I 1318
            |
plant   298 I 298

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RhoGAP93BNP_650939.2 PRP40 1..>75 CDD:227435
PAT1 <737..>892 CDD:401645
MyTH4 1004..1122 CDD:459939 19/63 (30%)
RhoGAP_KIAA1688 1133..1320 CDD:239854 52/186 (28%)
AT4G03100NP_192219.2 PBD 80..113 CDD:197628 12/44 (27%)
RhoGAP 140..298 CDD:214618 46/165 (28%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.