DRSC/TRiP Functional Genomics Resources

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Protein Alignment RhoGAP93B and arhgap39

DIOPT Version :9

Sequence 1:NP_650939.2 Gene:RhoGAP93B / 42496 FlyBaseID:FBgn0038853 Length:1330 Species:Drosophila melanogaster
Sequence 2:XP_031759882.1 Gene:arhgap39 / 101732569 XenbaseID:XB-GENE-6049004 Length:980 Species:Xenopus tropicalis


Alignment Length:1309 Identity:365/1309 - (27%)
Similarity:508/1309 - (38%) Gaps:458/1309 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 ERIEWVEIIEPRTKEHMYANLTTGECVWDPPEDVPIKRTDSSQWWELFDTNTQRFYYYNAATQKT 70
            ||:||||||||||:|.|||||.|||||||||..|.||||:.:|||||||.||.|||||||:||:|
 Frog     3 ERLEWVEIIEPRTRECMYANLITGECVWDPPAGVRIKRTNENQWWELFDPNTSRFYYYNASTQRT 67

  Fly    71 VWHRPSKCDIIPLAKLQTLKQNTDPSERREQTTPQKQQQQQVQHASQQQQHPSP-MSGPNKKGRG 134
            |||||..||||||||||||||||:                            || .|..|..|||
 Frog    68 VWHRPQNCDIIPLAKLQTLKQNTE----------------------------SPRASTENSPGRG 104

  Fly   135 QQRISGGNGTVASSEEKLTSSEVISSPRGRQSFRVSTGDSSRSMDMQQQHPQGYASRRSQDSCNQ 199
             ..||....|.:|.|::|...                |...|..|      |..|:|.|      
 Frog   105 -SNISREGSTSSSLEQELDGG----------------GGGERCPD------QAKANRHS------ 140

  Fly   200 YKESGKSSDSSLSSAHGYRRFNDSGVP---VSGHPDNLRLGSLQKQQRGGGKDNGAFEMLQESTS 261
                                     .|   |...||  |..||  :...|.|:....::.....|
 Frog   141 -------------------------APYFVVKEEPD--RTASL--RWNSGTKERMLIKVTDREPS 176

  Fly   262 SHNLPHGSTSTSSSYAGGSGYGDKYFDHQLLPNHLQGYSSKSSDIASPTHSIHTPQSQKKKMSPD 326
            .  |.|          .|:|:.         |::.||                            
 Frog   177 F--LMH----------QGNGFS---------PDNPQG---------------------------- 192

  Fly   327 AAPAAQYNYAQQQHQQRSAQRSGGGAAGTGAPAGKSYGGDREYKVSLARSGSFMSSSINPAAAGH 391
                           .||.:.||    |..:|..:|:..|.:..|....                
 Frog   193 ---------------TRSRKVSG----GQPSPGMQSFSVDTDSAVFFPE---------------- 222

  Fly   392 HSKSYRKSSAEAANGGAASDDSMHEKYFKSVEN----TPLSRRRHTTNATKSGGGASGSNTATST 452
                 ||.|                .|.|..::    :||..|              |.:..|. 
 Frog   223 -----RKPS----------------PYMKRADHVGSCSPLLGR--------------GDSFCTL- 251

  Fly   453 AGSGSSSHKKHSSDSSP-------------------QSPISPQTKSSRQAKTSATSTVPQLQHSP 498
                .|.|:||||:|.|                   ||||..:..:..|...|.:..|...|.||
 Frog   252 ----QSQHRKHSSESQPSSPRYAYEPPLYEEPPMEYQSPIYDEPPTEMQYDASGSYRVMSPQKSP 312

  Fly   499 ------RLQEPSHSLD------LLSLERISLGKSGPISPGGGTENLGLLTHSSRGSNDSARQ--- 548
                  .||.|..|.:      :|:.::.|             :....|.:|..| .:..||   
 Frog   313 IRKAHTYLQSPKQSSNSPYQQLVLTKQKCS-------------DRFMSLDYSPAG-KEYVRQLVY 363

  Fly   549 -RQKSNNSSANRSQSHHYP-----GQSSLRHSASSSLDKRGYHVGGGSGDGRGVTGGEKRRSKQH 607
             .|..::.....|..|.|.     |..||:|:.....|:|   :...|||...:.|.:.|     
 Frog   364 VEQTGSSPKMKTSVRHKYTPNTIGGSYSLQHNPPYMRDQR---LEVKSGDYSSMEGSDLR----- 420

  Fly   608 HYQQQADNSDVEYDNGNTSPLYTNWDQEMPHLLPLKHYIIEQAKLSGRYEYRGGDGGDSDSYHSD 672
            |.|||....|           ..:|..             :|..:|..        |.|.:....
 Frog   421 HNQQQLHGED-----------SMSWSS-------------QQDTMSST--------GYSPNTRKR 453

  Fly   673 SQSEHSLSGHEPDNE--DSDGGSDTHGGYLEHNYGMIDDYANMGDSVSYYAYMYPPHDPAGREDI 735
            ...:.||| .||:..  ::.|..:||                              ::|:|.:: 
 Frog   454 KSRKPSLS-LEPNTVPCEASGERETH------------------------------NEPSGADE- 486

  Fly   736 SENVEAVLEGIGGNATEPSAPTATAPKP---KPRYQISYYDTVSHSPS-----AGSGYHGQQLYS 792
                               .|::...:|   :...:.|..|....||.     |...:..||   
 Frog   487 -------------------RPSSMPNRPLMCRTESRSSEADMCRSSPETFLAHARLAWEAQQ--- 529

  Fly   793 NTPPYSGHGHGHHVPPPSLPHQQQLHLEPSDTKQKQSQTLPSPN---RQISRLAGAGHQGSGP-A 853
                    .|.|.....|...|:    :.|..:...:..||.|.   |..|.......|.|.. .
 Frog   530 --------AHFHMKQRSSWDSQK----DGSGYESDGAVPLPMPGPVVRAFSEDEALAQQDSKHWK 582

  Fly   854 ASSKEETGHSTVAGQQQVTVGTVTPASLSRPGHKMAPPSLKPTIQQ---IFPPSERAPGMGNLGL 915
            .|:.|:.|...:..::.|:|.|    :|:.|     .|.|.|:..:   .....|.:..|.|:  
 Frog   583 RSTFEKLGFPQILLEKSVSVQT----NLASP-----EPFLHPSQSEDLGACAQFENSRHMRNM-- 636

  Fly   916 GGPTLACM----------KECDIEKFAADNLNLHSKGIFRKKASVRDMLSWTAEAISRPMLALSR 970
             .|:.:|:          .|.|||.:|:.:.|.|::|:||:|.|:.:||||::|:|.:||: ::.
 Frog   637 -MPSSSCVFPTFTLRKPSSETDIENWASKHFNKHTQGLFRRKVSIANMLSWSSESIKKPMI-MTS 699

  Fly   971 DKADKKTAIELFKLVQIYMADRKARIGMTLNSVAIEIISASLPQQQLRDELYVQLCRQTTENPKR 1035
            |:..||.|.|:|||:|:||.||:|:....  |||:||.:.....|.||||||:|||||||||.:.
 Frog   700 DRNVKKEACEIFKLIQMYMGDRRAKSDQL--SVALEIATKGWSMQGLRDELYIQLCRQTTENFRY 762

  Fly  1036 DSLIRGWELMAICLSYVPPSPTFQPTLLNYVNRHRDPSFATCFMEVSKWPIHVQ----------- 1089
            :||..|||||.|||::.||:|.|...|..|:.||.||      :..:|...|::           
 Frog   763 ESLALGWELMTICLAFFPPTPKFHSYLEGYIYRHMDP------VNDTKVTRHIKELLERNNKKKS 821

  Fly  1090 -----------------ISHYATVCCRRLDRIGSSG-RRMAKKPTVDEVEQARQQILRNSMFGNT 1136
                             ||.||..|.|:|.|....| ::...||.::|:..||..:...|||.:|
 Frog   822 QVRKRAKSYIEEHDGVAISTYAKYCYRKLQRAALMGAKKGLNKPNMEEIRHARNAVFSPSMFSST 886

  Fly  1137 LSEVMDLQKEKFPFRKLPWIQTTLSEHVLLLNGKQTEGIFRVSADVDEVGCMKNRLDRWDVPDYK 1201
            |.|:|.:||:|:|.|:|||:||.|||.||.|||.||||||||..|:|||..:|.::|:|.:|   
 Frog   887 LQEIMSMQKDKYPDRQLPWVQTRLSEEVLALNGDQTEGIFRVPGDIDEVNALKLQVDQWKIP--- 948

  Fly  1202 NTLVDAHTP 1210
            ..|.|.|.|
 Frog   949 TGLEDPHVP 957

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RhoGAP93BNP_650939.2 WW 50..75 CDD:278809 20/24 (83%)
MyTH4 956..1122 CDD:295320 74/194 (38%)
RhoGAP_KIAA1688 1133..1320 CDD:239854 43/78 (55%)
arhgap39XP_031759882.1 PRP40 4..>72 CDD:227435 53/67 (79%)
WW 46..72 CDD:395320 21/25 (84%)
MyTH4 731..872 CDD:395633 53/146 (36%)
RhoGAP 883..>957 CDD:413382 42/76 (55%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 91 1.000 Domainoid score I7559
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 525 1.000 Inparanoid score I1218
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1123653at2759
OrthoFinder 1 1.000 - - FOG0003397
OrthoInspector 1 1.000 - - otm47847
Panther 1 1.100 - - O PTHR45876
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R3107
SonicParanoid 1 1.000 - - X3852
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
1010.100

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