DRSC/TRiP Functional Genomics Resources

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Protein Alignment HHEX and HB4

DIOPT Version :10

Sequence 1:NP_650938.2 Gene:HHEX / 42495 FlyBaseID:FBgn0038852 Length:323 Species:Drosophila melanogaster
Sequence 2:NP_182018.1 Gene:HB4 / 819100 AraportID:AT2G44910 Length:318 Species:Arabidopsis thaliana


Alignment Length:271 Identity:62/271 - (22%)
Similarity:92/271 - (33%) Gaps:108/271 - (39%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MDIATKSSKAAFSIENILEQKSSSHRSQSRRGSSQSPVAVTAGIATPHALAMPKASLATGSSSAA 65
            |.:.|.||.::|  :::..|.::|| .|.....|.:.:..::||         |.:.|..:|.|.
plant    29 MPLTTSSSSSSF--QHMHNQNNNSH-PQKIHNISWTHLFQSSGI---------KRTTAERNSDAG 81

  Fly    66 P------TPSPSSATNIYDLSREAAAAQYAMKSMDSSAVLAPTSLRFNPIYPDPASLFYQQVLQL 124
            .      .....|:..:.||..|||..     |..:|||   :||..|.                
plant    82 SFLRGFNVNRAQSSVAVVDLEEEAAVV-----SSPNSAV---SSLSGNK---------------- 122

  Fly   125 QKNPSLFMPHFQAAAVAAAAAVQPTAYCDQYSPFTMDCEGFPNPASAAAALYCNAYPAASFYMSN 189
                       :..|||..                    |..|.|..|:   |:           
plant   123 -----------RDLAVARG--------------------GDENEAERAS---CS----------- 142

  Fly   190 FGVKRKGG-----------------QIRFTSQQTKNLEARFASSKYLSPEERRHLALQLKLTDRQ 237
                |.||                 ::|.:..|...||..|.....|:|:::..||.||.|..||
plant   143 ----RGGGSGGSDDEDGGNGDGSRKKLRLSKDQALVLEETFKEHSTLNPKQKLALAKQLNLRARQ 203

  Fly   238 VKTWFQNRRAK 248
            |:.|||||||:
plant   204 VEVWFQNRRAR 214

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
HHEXNP_650938.2 Homeodomain 200..251 CDD:459649 22/49 (45%)
HB4NP_182018.1 HD-ZIP_N 8..124 CDD:461370 29/141 (21%)
Homeodomain 162..216 CDD:459649 22/53 (42%)
HALZ 218..261 CDD:128634
Blue background indicates that the domain is not in the aligned region.

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