DRSC/TRiP Functional Genomics Resources

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Protein Alignment HHEX and Isx

DIOPT Version :10

Sequence 1:NP_650938.2 Gene:HHEX / 42495 FlyBaseID:FBgn0038852 Length:323 Species:Drosophila melanogaster
Sequence 2:NP_001387929.1 Gene:Isx / 682968 RGDID:1592776 Length:242 Species:Rattus norvegicus


Alignment Length:91 Identity:30/91 - (32%)
Similarity:48/91 - (52%) Gaps:10/91 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly   201 FTSQQTKNLEARFASSKYLSPEERRHLALQLKLTDRQVKTWFQNRRAKWRRANLSKRSASAQGPI 265
            ||::|.:.||..|..:.|.....|..||.::.|.:.:|:.||||:|||||:...|...::.|.| 
  Rat    85 FTTEQLQELEKLFHFTHYPDIHVRSQLASRINLPEARVQIWFQNQRAKWRKQEKSGSLSAPQQP- 148

  Fly   266 AGAAVGSPSSASSSSVPVLNLGSGSR 291
                 ||.:.|..|:    ::|:..|
  Rat   149 -----GSCTDAHCSA----HIGATHR 165

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
HHEXNP_650938.2 Homeodomain 200..251 CDD:459649 20/49 (41%)
IsxNP_001387929.1 Homeodomain 79..135 CDD:459649 20/49 (41%)

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