DRSC/TRiP Functional Genomics Resources

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Protein Alignment HHEX and Barx2

DIOPT Version :10

Sequence 1:NP_650938.2 Gene:HHEX / 42495 FlyBaseID:FBgn0038852 Length:323 Species:Drosophila melanogaster
Sequence 2:NP_001414382.1 Gene:Barx2 / 679701 RGDID:1584840 Length:290 Species:Rattus norvegicus


Alignment Length:188 Identity:53/188 - (28%)
Similarity:76/188 - (40%) Gaps:32/188 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly   137 AAAVAAAAAVQPTAYCDQYSPFTMDCEGFPNPASAAAALYCNAYPAASFYMSNFGVKRKGGQIRF 201
            |||.|||||...|...:..:....:.|. |.|...                     |.:..:..|
  Rat   109 AAAAAAAAAAAETPGGEALASSESETEQ-PTPRQK---------------------KPRRSRTIF 151

  Fly   202 TSQQTKNLEARFASSKYLSPEERRHLALQLKLTDRQVKTWFQNRRAKWRRANLSKRSASAQGPIA 266
            |..|...||.:|...||||..:|..||..|.||..|||||:||||.||::..|.....:...|  
  Rat   152 TELQLMGLEKKFQKQKYLSTPDRLDLAQSLGLTQLQVKTWYQNRRMKWKKMVLKGGQEAPTKP-- 214

  Fly   267 GAAVGSPSSASSSSVPVL-NLGSGSRCGQQSDEEDRM-YLSEDDEDDDEDEGEADETP 322
               .|.|   ..:|:|.. .:.:..:...|:..:::: .|...:|..|..|.:|...|
  Rat   215 ---KGRP---KKNSIPTSEEIEAEEKMNSQAQSQEQLGSLQGQEEPRDPQEPKACLVP 266

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
HHEXNP_650938.2 Homeodomain 200..251 CDD:459649 27/50 (54%)
Barx2NP_001414382.1 None

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