Protein Alignment HHEX and hoxc13a

DIOPT Version :10

• Sequence 1: NP_650938.2
• Gene: HHEX / 42495
• FlyBaseID: FBgn0038852
• Length: 323
• Species: Drosophila melanogaster
• Sequence 2: NP_571618.1
• Gene: hoxc13a / 58059
• ZFINID: ZDB-GENE-000822-4
• Length: 306
• Species: Danio rerio
• Alignment Length: 286
• Identity: 63/286 - (22%)
• Similarity: 111/286 - (38%)
• Gaps: 72/286 - (25%)

  Fly    21 KSSSHRSQSRRG-SSQSPVAVTAGIATPHALAMPKASLATGSSSA------------APTPSPSS 72
            :::.::||...| |...|......:.:..||.....::||...|.            .|.|..||
Zfish    25 ENNQNKSQIMEGLSGNCPATHCRELISHPALGRHSGTIATHQGSVYSDISSPETGRQCPAPQTSS 89

  Fly    73 ATNI--------------------YDLSREAAAAQYAMKSMDSSAVLAPTSLRFN----PIYPDP 113
            :.::                    .:|.::..:...|.|..::|:.|....|...    ..||..
Zfish    90 SASLSYGYPFGNPYYGCRLSHSHNVNLQQKPCSYHPAEKYAETSSALPTEELSSRAKEFAFYPSL 154

  Fly   114 ASLFYQQVLQLQKNPSLFMPHFQAAAVAAAAAVQPTAYCDQYSPFTMDCEGFPNPASA---AAAL 175
            || .||.|           |.:...:|..:.:|.|....|...|.    ||:.:.|.:   ...:
Zfish   155 AS-SYQAV-----------PGYLDMSVVPSISVHPEPRHDALIPM----EGYQHWALSNGWDGQV 203

  Fly   176 YCNAYPAASFYM---------------SNFGVKRKGGQIRFTSQQTKNLEARFASSKYLSPEERR 225
            ||:.....|.::               |::...|| .::.:|..|.|.||..:|:||:::.::||
Zfish   204 YCSKEQTQSSHLWKSPFPDVVPLQPEVSSYRRGRK-KRVPYTKIQLKELEKEYAASKFITKDKRR 267

  Fly   226 HLALQLKLTDRQVKTWFQNRRAKWRR 251
            .::....|::|||..||||||.|.::
Zfish   268 RISATTNLSERQVTIWFQNRRVKEKK 293

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
HHEX	NP_650938.2	Homeodomain	200..251	CDD:459649	21/50 (42%)
hoxc13a	NP_571618.1	HoxA13_N	34..144	CDD:463521	18/109 (17%)
		Homeodomain	237..293	CDD:459649	23/56 (41%)