DRSC/TRiP Functional Genomics Resources

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Protein Alignment HHEX and hoxa5a

DIOPT Version :10

Sequence 1:NP_650938.2 Gene:HHEX / 42495 FlyBaseID:FBgn0038852 Length:323 Species:Drosophila melanogaster
Sequence 2:XP_073787191.1 Gene:hoxa5a / 58055 ZFINID:ZDB-GENE-000823-9 Length:265 Species:Danio rerio


Alignment Length:272 Identity:65/272 - (23%)
Similarity:105/272 - (38%) Gaps:71/272 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MDIATKSSKAAFSIENILEQKSSSHRSQSRRGS-SQSPV----AVTAGIATPHALAMPKASLATG 60
            ||::|..|.....:       ||..|:||.:.| :.:||    .|||..|.|.:..:|.:|||. 
Zfish    51 MDLSTGHSSPGHFL-------SSGERTQSYKDSPTATPVRYNQPVTASSAEPSSDHLPCSSLAN- 107

  Fly    61 SSSAAPTPSPSSATNIYDLSREAAAAQYAMKSMDSSAVLAPTSLRFNPIYPDPASLFYQQVLQLQ 125
                :|....|.......||..|.:|..:..::.|...::..|                ..::.:
Zfish   108 ----SPVSEQSHRALKISLSSTAGSASKSFGTVLSREGVSKVS----------------SSMEEE 152

  Fly   126 KNPSLFMPHFQAAAVAAAAAVQPTAYCDQYSPFTMDCEGFPNPASAAAALYCNAYPAASFYMSN- 189
            |.|.           :...|.|..:...|..|:                       ....::|: 
Zfish   153 KPPG-----------SGQTASQNVSEAPQIYPW-----------------------MRKLHISHD 183

  Fly   190 --FGVKRKGGQIRFTSQQTKNLEARFASSKYLSPEERRHLALQLKLTDRQVKTWFQNRRAKWRRA 252
              .|.:.|..:..:|..||..||..|..::||:...|..:|..|.|::||:|.||||||.||::.
Zfish   184 NLAGPEGKRPRTAYTRYQTLELEKEFHFNRYLTRRRRIEIAHTLCLSERQIKIWFQNRRMKWKKD 248

  Fly   253 N-LSKRSASAQG 263
            | |...:.:|.|
Zfish   249 NKLKSMNMAAAG 260

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
HHEXNP_650938.2 Homeodomain 200..251 CDD:459649 23/50 (46%)
hoxa5aXP_073787191.1 None

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