Protein Alignment HHEX and hoxc1a

DIOPT Version :10

• Sequence 1: NP_650938.2
• Gene: HHEX / 42495
• FlyBaseID: FBgn0038852
• Length: 323
• Species: Drosophila melanogaster
• Sequence 2: NP_571606.1
• Gene: hoxc1a / 58046
• ZFINID: ZDB-GENE-000822-2
• Length: 302
• Species: Danio rerio
• Alignment Length: 87
• Identity: 34/87 - (39%)
• Similarity: 47/87 - (54%)
• Gaps: 5/87 - (5%)

  Fly   196 GGQIRFTSQQTKNLEARFASSKYLSPEERRHLALQLKLTDRQVKTWFQNRRAKWRRANLSKRSAS 260
            |.:..||::|...||..|..:|||:...|..:|..|:|::.|||.||||||.|.::   ..|...
Zfish   217 GSRTNFTTKQLTELEKEFHFNKYLTRARRIEIANPLQLSETQVKIWFQNRRMKQKK---MLREGL 278

  Fly   261 AQG--PIAGAAVGSPSSASSSS 280
            |||  .|:|....|..|.:.||
Zfish   279 AQGLMLISGCDEDSKKSDTCSS 300

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
HHEX	NP_650938.2	Homeodomain	200..251	CDD:459649	23/50 (46%)
hoxc1a	NP_571606.1	Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite	198..224		2/6 (33%)
		Homeodomain	218..272	CDD:459649	23/53 (43%)