DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment HHEX and alx1

DIOPT Version :10

Sequence 1:NP_650938.2 Gene:HHEX / 42495 FlyBaseID:FBgn0038852 Length:323 Species:Drosophila melanogaster
Sequence 2:NP_001038539.1 Gene:alx1 / 565176 ZFINID:ZDB-GENE-050419-191 Length:320 Species:Danio rerio


Alignment Length:227 Identity:56/227 - (24%)
Similarity:88/227 - (38%) Gaps:73/227 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly   107 NPIYPDPASLFYQQVLQLQKNPSLFMPHFQAAAVAAAAAVQPTAYCDQYSPFTMDCEGFPNPASA 171
            |..|.:.||....|...:|.|..    |         :::..::.||..|..|     :..|.|.
Zfish    31 NVQYYNKASPKCVQAFPMQSNDQ----H---------SSMDRSSPCDNQSSVT-----YCAPKSE 77

  Fly   172 AAALY-----CN--AYPAAS----FYMSNFG---------VKRKGGQIRFTSQQTKNLEARFASS 216
            .::|:     |:  ..||.|    ..:...|         .|::..:..|||.|.:.||..|..:
Zfish    78 ESSLHAMENCCSLRVSPATSGPDKTDLDELGEKCDSNVSSSKKRRHRTTFTSAQLEELEKVFQKT 142

  Fly   217 KYLSPEERRHLALQLKLTDRQVKTWFQNRRAKWRR--------------------ANLSKRSASA 261
            .|.....|..||::.:||:.:|:.||||||||||:                    :.|.:..:.:
Zfish   143 HYPDVYVREQLAMRTELTEARVQVWFQNRRAKWRKRERYGQIQQAKSHFAATYDISMLPRTDSYS 207

  Fly   262 Q-------GPIAGAAV--------GSPSSASS 278
            |       ||.||::|        |||...:|
Zfish   208 QISNNLWTGPSAGSSVVSSCMIPRGSPPCVTS 239

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
HHEXNP_650938.2 Homeodomain 200..251 CDD:459649 23/50 (46%)
alx1NP_001038539.1 Homeodomain 121..177 CDD:459649 23/55 (42%)
Transactivation domain. /evidence=ECO:0000250|UniProtKB:Q63087 180..320 11/60 (18%)
OAR 296..314 CDD:461067
OAR. /evidence=ECO:0000255|PROSITE-ProRule:PRU00138 300..313
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.