Protein Alignment HHEX and Hoxb4

DIOPT Version :10

• Sequence 1: NP_650938.2
• Gene: HHEX / 42495
• FlyBaseID: FBgn0038852
• Length: 323
• Species: Drosophila melanogaster
• Sequence 2: NP_001094257.1
• Gene: Hoxb4 / 497988
• RGDID: 1560113
• Length: 250
• Species: Rattus norvegicus
• Alignment Length: 251
• Identity: 62/251 - (24%)
• Similarity: 88/251 - (35%)
• Gaps: 66/251 - (26%)

  Fly    99 LAPTSLRFNPIYPDPASLFYQQVLQLQKNPSLFMPHFQAAAVAAAAAVQPTAYCDQYSPFTMD-- 161
            :|.:|...|..|.||.....::..|....||...|.:.|......:..||.|...:.:|.|:.
  Rat     1 MAMSSFLINSNYVDPKFPPCEEYSQSDYLPSDHSPGYYAGGQRRESGFQPEAAFGRRAPCTVQRY 65

  Fly   162 --CE--GFPNP------------------ASAAAALY---------------------------- 176
              |.  |.|.|                  .|.|.||.
  Rat    66 AACRDPGPPPPPPPPPPPPPPGLSPRAPVQSTAGALLPEPGQRSEVVSSSPPPPPCAQNPLHPSP 130

  Fly   177 ----CN---AYP-AASFYMSNFGVKRKGGQIR-----FTSQQTKNLEARFASSKYLSPEERRHLA 228
                |.   .|| ....::|.......||:.:     :|.||...||..|..::||:...|..:|
  Rat   131 SHSACKEPVVYPWMRKVHVSTVNPNYAGGEPKRSRTAYTRQQVLELEKEFHYNRYLTRRRRVEIA 195

  Fly   229 LQLKLTDRQVKTWFQNRRAKWRRANLSKRSASAQGPIAGAAVGSPSSASSSSVPVL 284
            ..|.|::||:|.||||||.||::.:....:....|..|||| |.|....:...|.|
  Rat   196 HALCLSERQIKIWFQNRRMKWKKDHKLPNTKIRSGGTAGAA-GGPPGRPNGGPPAL 250

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
HHEX	NP_650938.2	Homeodomain	200..251	CDD:459649	23/55 (42%)
Hoxb4	NP_001094257.1	Homeodomain	162..218	CDD:459649	23/55 (42%)