DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment HHEX and alx4b

DIOPT Version :10

Sequence 1:NP_650938.2 Gene:HHEX / 42495 FlyBaseID:FBgn0038852 Length:323 Species:Drosophila melanogaster
Sequence 2:NP_001297007.2 Gene:alx4b / 497424 ZFINID:ZDB-GENE-050208-140 Length:364 Species:Danio rerio


Alignment Length:116 Identity:43/116 - (37%)
Similarity:54/116 - (46%) Gaps:26/116 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly   188 SNFGVKRKGGQIRFTSQQTKNLEARFASSKYLSPEERRHLALQLKLTDRQVKTWFQNRRAKWRRA 252
            ||.|.||: .:..|||.|.:.||..|..:.|.....|..|||:..||:.:|:.||||||||||  
Zfish   166 SNKGKKRR-NRTTFTSYQLEELEKVFQKTHYPDVYAREQLALRTDLTEARVQVWFQNRRAKWR-- 227

  Fly   253 NLSKRSASAQ------------------GPIAGAAVGSPS--SASSSSVPV 283
               ||....|                  .|...|.:.:||  |.|||:.||
Zfish   228 ---KRERFGQMQQVRTHFSTAYELPLLTRPENYAQIQNPSWLSGSSSASPV 275

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
HHEXNP_650938.2 Homeodomain 200..251 CDD:459649 24/50 (48%)
alx4bNP_001297007.2 None

Return to query results.
Submit another query.