DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment HHEX and Dr

DIOPT Version :10

Sequence 1:NP_650938.2 Gene:HHEX / 42495 FlyBaseID:FBgn0038852 Length:323 Species:Drosophila melanogaster
Sequence 2:NP_477324.1 Gene:Dr / 45285 FlyBaseID:FBgn0000492 Length:515 Species:Drosophila melanogaster


Alignment Length:314 Identity:77/314 - (24%)
Similarity:115/314 - (36%) Gaps:104/314 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly    26 RSQSRRGSSQ--SPVAVTAGIATPHALAMPKASLATGSSSAAPTP----SP-------------- 70
            |.|.::..::  ||.|.|:  :||.:..:..|..:.|:.::.|..    ||              
  Fly   224 RQQQQQADARANSPPASTS--STPSSTPLGSALGSQGNVASTPAKNERHSPLGSHTDSELEYDEE 286

  Fly    71 -------------SSATNIYDLSREAA------AAQYAMKSMDS-----------SAVLAPTSLR 105
                         .|..:|.|::.:.:      ....:.||::|           |.:|:|.:|.
  Fly   287 MLQDHEADHDEEEDSIVDIEDMNADDSPRSTPDGLDGSGKSLESPHGPPPGSHMQSTILSPAALA 351

  Fly   106 FN--PIYPDPASLFYQQVLQLQKNPSLFMPHFQAAAVAAAA-----AVQPTAYCDQYSPF----T 159
            ..  ||.|.|                     |.|.|.||.|     ...|.....|..||    .
  Fly   352 SGHVPIRPTP---------------------FSALAAAAVAWTGMGGGVPWPGTRQMPPFGPPGM 395

  Fly   160 MDCEGFPNPASAAAALYCNAYPAASFYMSNFGVKRKGGQIRFTSQQTKNLEARFASSKYLSPEER 224
            ....||...|:....:.||        :......|| .:..||:||..:||.:|...:|||..||
  Fly   396 FPGAGFGGDANEPPRIKCN--------LRKHKPNRK-PRTPFTTQQLLSLEKKFREKQYLSIAER 451

  Fly   225 RHLALQLKLTDRQVKTWFQNRRAKWRR-----------ANLSKRSASAQGPIAG 267
            ...:..|:||:.|||.||||||||.:|           |.|.:.:..||..:||
  Fly   452 AEFSSSLRLTETQVKIWFQNRRAKAKRLQEAEIEKIKMAALGRGAPGAQWAMAG 505

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
HHEXNP_650938.2 Homeodomain 200..251 CDD:459649 26/50 (52%)
DrNP_477324.1 Homeodomain 422..478 CDD:459649 28/56 (50%)

Return to query results.
Submit another query.