Protein Alignment HHEX and hoxc8

DIOPT Version :10

• Sequence 1: NP_650938.2
• Gene: HHEX / 42495
• FlyBaseID: FBgn0038852
• Length: 323
• Species: Drosophila melanogaster
• Sequence 2: NP_001006787.1
• Gene: hoxc8 / 448482
• XenbaseID: XB-GENE-480999
• Length: 242
• Species: Xenopus tropicalis
• Alignment Length: 288
• Identity: 69/288 - (23%)
• Similarity: 116/288 - (40%)
• Gaps: 73/288 - (25%)

  Fly    53 PKASLATGSSSAAPT------PSPSSATN--IYDLSREAAAAQYAMKSMD-----SSAVLAPTSL 104
            |..|...|..|..||      |...|.::  :|..|..|...|:....:.     .|:.|:.:..
 Frog     8 PLFSKYKGGESLEPTYYDCRFPQSVSRSHALVYGPSATAPGFQHPSHHVQEFFHHGSSSLSNSGF 72

  Fly   105 RFNP----IYPDPASLFYQQVLQLQKNPSLFMPHFQAAAVAAAAAVQPTAYCDQYSPFTMDCEGF 165
            :.||    .:.|.:..:..:.|..|   ||:....:|:.|             ||.    ||:..
 Frog    73 QQNPCALTCHGDASKFYGYEALPRQ---SLYGAQQEASVV-------------QYP----DCKSS 117

  Fly   166 --PNPASAAAALYCNAYPAASF-YMSNFGVKRKGGQIRFTSQQTKNLEARFASSKYLSPEERRHL 227
              .|.:.....|..|:.|:..| :|......|:.|:..::..||..||..|..:.||:.:.|..:
 Frog   118 SNTNTSEGQGHLNQNSSPSLMFPWMRPHAPGRRSGRQTYSRYQTLELEKEFLFNPYLTRKRRIEV 182

  Fly   228 ALQLKLTDRQVKTWFQNRRAKWRRANLSKRSASAQGPIAGAAVGSPSSASSSSVPVLNLGSGSRC 292
            :..|.||:||||.||||||.||::.|                       :...:|      |:|.
 Frog   183 SHALGLTERQVKIWFQNRRMKWKKEN-----------------------NKDKLP------GARD 218

  Fly   293 GQQSDEEDRMYLSEDDEDDDEDEGEADE 320
            .::::||.    :|::|.::|:..|:.|
 Frog   219 EEKTEEEG----NEEEEKEEEESKESKE 242

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
HHEX	NP_650938.2	Homeodomain	200..251	CDD:459649	23/50 (46%)
hoxc8	NP_001006787.1	Homeodomain	150..206	CDD:459649	24/55 (44%)