Protein Alignment HHEX and ro

DIOPT Version :10

• Sequence 1: NP_650938.2
• Gene: HHEX / 42495
• FlyBaseID: FBgn0038852
• Length: 323
• Species: Drosophila melanogaster
• Sequence 2: NP_524521.1
• Gene: ro / 43234
• FlyBaseID: FBgn0003267
• Length: 350
• Species: Drosophila melanogaster
• Alignment Length: 352
• Identity: 84/352 - (23%)
• Similarity: 128/352 - (36%)
• Gaps: 119/352 - (33%)

  Fly    30 RRGSSQSPVAVTAGIATPHALAMPK-------ASLATGSS--------SAAPTPSPSSATNIYDL 79
            :|..|..|:|.|..::.|...:.|:       ..|.|.||        :.|..|.|.......|.
  Fly    18 KRSDSLDPIANTTILSVPQRPSSPRQFFERLYGHLETRSSENGEIDVGTHAHKPPPCDTPYHSDG 82

  Fly    80 SREAAAAQYAMKSMDSSAVLAPTSLRFNPIYP------------------------DPASLFYQQ 120
            .        ::.|.|.|.....|||...|.|.                        .|..|.:|:
  Fly    83 G--------SVSSPDISISDERTSLAAYPAYDFYGHAKDYPQHPSQQHQQHHHHHHHPPQLVHQK 139

  Fly   121 VLQLQKNPSLFMPHFQAAAVAAAAAVQPTAYCDQYSPFTMDCEGFPNPASAAAALYCNAYPAASF 185
            :..:...|::       ||..||..|.|.|:     |     .|||:....:|..  :|:.|..
  Fly   140 LSYVSPPPAI-------AAGGAANPVLPHAF-----P-----AGFPSDPHFSAGF--SAFLARR- 184

  Fly   186 YMSNFGVKRKGGQIR-----FTSQQTKNLEARFASSKYLSPEERRHLALQLKLTDRQVKTWFQNR 245
                   :||.|:.|     |:::||..||..|..::|:|...|..||..|:||:.|:|.|||||
  Fly   185 -------RRKEGRQRRQRTTFSTEQTLRLEVEFHRNEYISRSRRFELAETLRLTETQIKIWFQNR 242

  Fly   246 RAKWRR---------------ANLSKRSASAQ--------GPIAGAAVG-----SPSSASSSSVP 282
            |||.:|               ||....|...|        |...|.|||     ..::|:.:::|
  Fly   243 RAKDKRIEKAQIDQHYRNFVVANGFMSSIMGQAATTMPPGGVTGGVAVGVGLNYYAAAATPAALP 307

  Fly   283 VLNLGSGSRCGQQSDEEDRMYLSEDDE 309
                        :.:.:|..::..||:
  Fly   308 ------------KDNTQDANFIDIDDQ 322

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
HHEX	NP_650938.2	Homeodomain	200..251	CDD:459649	25/55 (45%)
ro	NP_524521.1	Homeodomain	196..248	CDD:459649	24/51 (47%)