DRSC/TRiP Functional Genomics Resources

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Protein Alignment HHEX and pb

DIOPT Version :10

Sequence 1:NP_650938.2 Gene:HHEX / 42495 FlyBaseID:FBgn0038852 Length:323 Species:Drosophila melanogaster
Sequence 2:NP_476669.3 Gene:pb / 40826 FlyBaseID:FBgn0051481 Length:782 Species:Drosophila melanogaster


Alignment Length:123 Identity:35/123 - (28%)
Similarity:50/123 - (40%) Gaps:43/123 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly   201 FTSQQTKNLEARFASSKYLSPEERRHLALQLKLTDRQVKTWFQNRRAKWRRANLSKRSASAQGPI 265
            :|:.|...||..|..:|||....|..:|..|.||:||||.||||||.|.:|..|||         
  Fly   205 YTNTQLLELEKEFHFNKYLCRPRRIEIAASLDLTERQVKVWFQNRRMKHKRQTLSK--------- 260

  Fly   266 AGAAVGSPSSASSSSVPVLNLGSGSRCGQQSDEEDRMYLSEDDEDDDEDEGEADETPK 323
                                          :|:||    ::|....|:|:.:::...|
  Fly   261 ------------------------------TDDED----NKDSLKGDDDQSDSNSNSK 284

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
HHEXNP_650938.2 Homeodomain 200..251 CDD:459649 24/49 (49%)
pbNP_476669.3 Homeodomain 199..255 CDD:459649 24/49 (49%)

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