Protein Alignment HHEX and Gsx2

DIOPT Version :10

• Sequence 1: NP_650938.2
• Gene: HHEX / 42495
• FlyBaseID: FBgn0038852
• Length: 323
• Species: Drosophila melanogaster
• Sequence 2: NP_001131035.2
• Gene: Gsx2 / 364140
• RGDID: 1308047
• Length: 305
• Species: Rattus norvegicus
• Alignment Length: 307
• Identity: 76/307 - (24%)
• Similarity: 105/307 - (34%)
• Gaps: 88/307 - (28%)

  Fly    23 SSHRSQSRRGSSQSPVAVTAGIATPHALAMPKASLATGSSSAAP------TPSPSSA---TNIYD 78
            :||...||      |.|...|.||..|.|........|.:.|.|      :|.|..|   ..:..
  Rat    66 TSHLHSSR------PPAGAGGGATGTAGAAVAGGGVAGGTGALPLLKSQFSPGPGDAQFCPRVSH 124

  Fly    79 LSREAAAAQYAMKSMDSSAVLAPTSLRFNPIYPDPASLFYQQVLQLQKNPSLFMPHFQAAAVAAA 143
            ......|.|:...             ...|..|..|:                    .|||.|||
  Rat   125 AHHHHHAPQHHHH-------------HHQPQQPGSAA--------------------AAAAAAAA 156

  Fly   144 AAVQPTAYCDQYSPFTMDCEGFP-NPASAAAALYCNAYPAASFYMSNFGVK-----RKGGQIR-- 200
            ||....|.            |.| :.|...||...|......|:....|..     ..|.::|
  Rat   157 AAAAAAAL------------GHPQHHAPVCAATTYNVSDPRRFHCLTMGGSDTSQVPNGKRMRTA 209

  Fly   201 FTSQQTKNLEARFASSKYLSPEERRHLALQLKLTDRQVKTWFQNRRAKWRRANLSKRSASAQGPI 265
            |||.|...||..|:|:.|||...|..:|..|.|:::|||.||||||.|.::..   :.||.....
  Rat   210 FTSTQLLELEREFSSNMYLSRLRRIEIATYLNLSEKQVKIWFQNRRVKHKKEG---KGASRNNHA 271

  Fly   266 AGAAVGSPSSASSSSVPVLNLGSGSRCGQQSDEEDRMYLSEDDEDDD 312
            :...|||.:..:                 :|::||.:..:..:||.:
  Rat   272 SCKCVGSQAHYA-----------------RSEDEDSLSPASANEDKE 301

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
HHEX	NP_650938.2	Homeodomain	200..251	CDD:459649	26/52 (50%)
Gsx2	NP_001131035.2	Homeodomain	204..260	CDD:459649	26/55 (47%)