DRSC/TRiP Functional Genomics Resources

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Protein Alignment HHEX and HOXD4

DIOPT Version :10

Sequence 1:NP_650938.2 Gene:HHEX / 42495 FlyBaseID:FBgn0038852 Length:323 Species:Drosophila melanogaster
Sequence 2:NP_055436.2 Gene:HOXD4 / 3233 HGNCID:5138 Length:255 Species:Homo sapiens


Alignment Length:233 Identity:60/233 - (25%)
Similarity:82/233 - (35%) Gaps:72/233 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    68 PSPSSATNIYDLSRE--AAAAQYAMKSMDSSAVLAPTSLRFNPIYPDPASLFYQQVLQLQ----- 125
            |.|.||.......:|  .....||.......|..||      |..|.|.:..|.|....|     
Human    67 PGPGSALPARGHGQEPGGPGGHYAAPGEPCPAPPAP------PPAPLPGARAYSQSDPKQPPSGT 125

  Fly   126 --KNPSLFMPHFQAAAVAAAAAVQPTAYCDQYSPFTMDCEGFPNPASAAAALYCNAYPAASFYMS 188
              |.|::..|..:...|.:.                       ||                    
Human   126 ALKQPAVVYPWMKKVHVNSV-----------------------NP-------------------- 147

  Fly   189 NF-GVKRKGGQIRFTSQQTKNLEARFASSKYLSPEERRHLALQLKLTDRQVKTWFQNRRAKWRR- 251
            |: |.:.|..:..:|.||...||..|..::||:...|..:|..|.|::||:|.||||||.||:: 
Human   148 NYTGGEPKRSRTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHTLCLSERQIKIWFQNRRMKWKKD 212

  Fly   252 ---ANLSKRSASAQGPIAGAAVGSPSSASSSSVPVLNL 286
               .|...||:|:         .|.||.|||..|..:|
Human   213 HKLPNTKGRSSSS---------SSSSSCSSSVAPSQHL 241

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
HHEXNP_650938.2 Homeodomain 200..251 CDD:459649 23/50 (46%)
HOXD4NP_055436.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 31..127 16/65 (25%)
Antp-type hexapeptide 133..138 1/4 (25%)
Homeodomain 155..211 CDD:459649 24/55 (44%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 212..255 12/39 (31%)

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