DRSC/TRiP Functional Genomics Resources

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Protein Alignment HHEX and HOXD3

DIOPT Version :10

Sequence 1:NP_650938.2 Gene:HHEX / 42495 FlyBaseID:FBgn0038852 Length:323 Species:Drosophila melanogaster
Sequence 2:NP_008829.3 Gene:HOXD3 / 3232 HGNCID:5137 Length:432 Species:Homo sapiens


Alignment Length:325 Identity:75/325 - (23%)
Similarity:112/325 - (34%) Gaps:82/325 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 KSSKAAFSIENILEQKSSSHRSQSRRGS-SQSPVAVTAGIATPHALAMPKASLATGSSSAAPTPS 69
            :..:.|..:.....||::.:.:....|. ..|....|.|.:|||                .|.|.
Human     4 EQGQQALELPECTMQKAAYYENPGLFGGYGYSKTTDTYGYSTPH----------------QPYPP 52

  Fly    70 PSSATNIYDLSREAAAAQYAMKSMDSSAVL-AP----TSLRFNPIYP-------------DPASL 116
            |::|::: |.....:|.     |:.|||.| ||    ..|..:.:.|             .|...
Human    53 PAAASSL-DTDYPGSAC-----SIQSSAPLRAPAHKGAELNGSCMRPGTGNSQGGGGGSQPPGLN 111

  Fly   117 FYQQVLQLQKNPSLFMPHFQAAAVAAAAAVQPTAYCDQYSPFTMDCEGFPNPASAAAALYCNAYP 181
            ..||..|....|....|...........|.:|              :|.||.:|::|.:....:|
Human   112 SEQQPPQPPPPPPTLPPSSPTNPGGGVPAKKP--------------KGGPNASSSSATISKQIFP 162

  Fly   182 AASFYMSNF-------------------GVKRKGGQIRFTSQQTKNLEARFASSKYLSPEERRHL 227
            .......|.                   |...|..:..:||.|...||..|..::||....|..:
Human   163 WMKESRQNSKQKNSCATAGESCEDKSPPGPASKRVRTAYTSAQLVELEKEFHFNRYLCRPRRVEM 227

  Fly   228 ALQLKLTDRQVKTWFQNRRAKWRRANLSK--------RSASAQGPIAGAAVGSPSSASSSSVPVL 284
            |..|.||:||:|.||||||.|:::...:|        :|.....|:.|||.....|.....||.|
Human   228 ANLLNLTERQIKIWFQNRRMKYKKDQKAKGILHSPASQSPERSPPLGGAAGHVAYSGQLPPVPGL 292

  Fly   285  284
            Human   293  292

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
HHEXNP_650938.2 Homeodomain 200..251 CDD:459649 23/50 (46%)
HOXD3NP_008829.3 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 43..62 8/35 (23%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 68..197 26/147 (18%)
Antp-type hexapeptide 160..165 1/4 (25%)
Homeodomain 195..251 CDD:459649 24/55 (44%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 253..280 6/26 (23%)
DUF4074 369..430 CDD:463833
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 400..432
Blue background indicates that the domain is not in the aligned region.

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