DRSC/TRiP Functional Genomics Resources

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Protein Alignment HHEX and HOXD1

DIOPT Version :10

Sequence 1:NP_650938.2 Gene:HHEX / 42495 FlyBaseID:FBgn0038852 Length:323 Species:Drosophila melanogaster
Sequence 2:NP_078777.1 Gene:HOXD1 / 3231 HGNCID:5132 Length:328 Species:Homo sapiens


Alignment Length:313 Identity:82/313 - (26%)
Similarity:114/313 - (36%) Gaps:92/313 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly    45 ATPHALAMPKASLATGS---------SSAAPTPSPSSATNIYDLSREA----AAAQYAMKSMDSS 96
            |.|.|| .|...|..|.         ::|.|:|||.:|.     :|.:    ||.|||..:::.:
Human    32 ARPVAL-QPAFPLGNGDGAFVSCLPLAAARPSPSPPAAP-----ARPSVPPPAAPQYAQCTLEGA 90

  Fly    97 --AVLAPTS---------LRFNPIYPDPASLFYQQVLQLQKNPSLFMPHFQAAAV---------- 140
              ...||.:         |...|.|..|.      ||....:......|:..:||          
Human    91 YEPGAAPAAAAGGADYGFLGSGPAYDFPG------VLGRAADDGGSHVHYATSAVFSGGGSFLLS 149

  Fly   141 -----AAAAAVQPTAYCDQYSPFTMDCEGFP---NPASAAAALY------CNAYPAASFYMSNFG 191
                 ||.....|...|.:.|     .:|.|   ..||.|...|      .:..|||........
Human   150 GQVDYAAFGEPGPFPACLKAS-----ADGHPGAFQTASPAPGTYPKSVSPASGLPAAFSTFEWMK 209

  Fly   192 VKR---KGGQI--------------RFTSQQTKNLEARFASSKYLSPEERRHLALQLKLTDRQVK 239
            |||   |.|::              .|:::|...||..|..:|||:...|..:|..|.|.|.|||
Human   210 VKRNASKKGKLAEYGAASPSSAIRTNFSTKQLTELEKEFHFNKYLTRARRIEIANCLHLNDTQVK 274

  Fly   240 TWFQNRRAKWRRANLSKRSASA------QGPIAGAA----VGSPSSASSSSVP 282
            .||||||.|.::.......|:|      |.|::|..    :.:|.|.|.|..|
Human   275 IWFQNRRMKQKKREREGLLATAIPVAPLQLPLSGTTPTKFIKNPGSPSQSQEP 327

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
HHEXNP_650938.2 Homeodomain 200..251 CDD:459649 23/50 (46%)
HOXD1NP_078777.1 Antp-type hexapeptide 204..209 0/4 (0%)
Homeodomain 233..286 CDD:459649 23/52 (44%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 305..328 7/23 (30%)

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