DRSC/TRiP Functional Genomics Resources

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Protein Alignment HHEX and HOXC13

DIOPT Version :10

Sequence 1:NP_650938.2 Gene:HHEX / 42495 FlyBaseID:FBgn0038852 Length:323 Species:Drosophila melanogaster
Sequence 2:NP_059106.2 Gene:HOXC13 / 3229 HGNCID:5125 Length:330 Species:Homo sapiens


Alignment Length:251 Identity:62/251 - (24%)
Similarity:102/251 - (40%) Gaps:46/251 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    47 PHALAMPKASLAT------GSSSAAPTPSP---SSATNIYDLSREAAAAQYAMKSMDSSAVLAPT 102
            |..|..|:.::.|      .:...||.|:|   ||||..|  ......:.|..: :..:..|...
Human    82 PAPLGAPQGAVYTDIPAPEAARQCAPPPAPPTSSSATLGY--GYPFGGSYYGCR-LSHNVNLQQK 143

  Fly   103 SLRFNP--IYPDPASLFYQQVLQLQKNPSLFMPHFQAA----------AVAAAAAVQPTAYCDQY 155
            ...::|  .||:|:.......|..:.....|.|.|.::          :|....:..|....|..
Human   144 PCAYHPGDKYPEPSGALPGDDLSSRAKEFAFYPSFASSYQAMPGYLDVSVVPGISGHPEPRHDAL 208

  Fly   156 SPFTMDCEGFPNPA---------------SAAAALYCNAYPAASFYMSNFGVKRKGGQIR--FTS 203
            .|    .||:.:.|               |.:|.|:.:.:|............|:|.:.|  :|.
Human   209 IP----VEGYQHWALSNGWDSQVYCSKEQSQSAHLWKSPFPDVVPLQPEVSSYRRGRKKRVPYTK 269

  Fly   204 QQTKNLEARFASSKYLSPEERRHLALQLKLTDRQVKTWFQNRRAKWRRANLSKRSA 259
            .|.|.||..:|:||:::.|:||.::....|::|||..||||||.|.::. :||..|
Human   270 VQLKELEKEYAASKFITKEKRRRISATTNLSERQVTIWFQNRRVKEKKV-VSKSKA 324

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
HHEXNP_650938.2 Homeodomain 200..251 CDD:459649 23/52 (44%)
HOXC13NP_059106.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 30..50
HoxA13_N 54..168 CDD:463521 20/88 (23%)
Homeodomain 261..312 CDD:459649 20/50 (40%)
Blue background indicates that the domain is not in the aligned region.

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