DRSC/TRiP Functional Genomics Resources

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Protein Alignment HHEX and nkx2.5

DIOPT Version :10

Sequence 1:NP_650938.2 Gene:HHEX / 42495 FlyBaseID:FBgn0038852 Length:323 Species:Drosophila melanogaster
Sequence 2:NP_571496.2 Gene:nkx2.5 / 30696 ZFINID:ZDB-GENE-980526-321 Length:314 Species:Danio rerio


Alignment Length:254 Identity:70/254 - (27%)
Similarity:98/254 - (38%) Gaps:54/254 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    63 SAAPTPSPSSATNIYDLSREAAAAQYAMKSMDSS----AVLAPTSLRFNPIY--------PDPAS 115
            |:..|.:|.|..:|.:|.:.    |..|.|:|.|    :.|.|||......:        |..:|
Zfish     5 SSQMTSTPFSVRDILNLEQN----QEDMVSLDMSQRLDSALIPTSSCMLSTFKQEQFMEMPSGSS 65

  Fly   116 LFYQQVLQLQKNPSLFMPHFQAAAVAAAAAVQPTAYCDQYSPFTMD--------CEGFPNPASAA 172
            ||.:. ||..|...:...:|.|:...|...::.....|..:..|.:        |          
Zfish    66 LFSED-LQEDKGNKINSINFSASGFYAKNFLEMDYVKDAKTDDTFEDKEKKDIGC---------- 119

  Fly   173 AALYCNAYPAASFYMSNF----GVKRKGGQIRFTSQQTKNLEARFASSKYLSPEERRHLALQLKL 233
                |...|.....:.:.    ..||:..::.|:..|...||.||...||||..||.|||..|||
Zfish   120 ----CQEDPGEDLKLDDAERPKQRKRRKPRVLFSQAQVYELERRFKQQKYLSAPERDHLANVLKL 180

  Fly   234 TDRQVKTWFQNRRAKWRRANLSKRSASAQGPIAGAAVGSPSSASSSSVPVLNLGSGSRC 292
            |..|||.||||||.|.:|....:       .:....:..|...   ||||| :..|..|
Zfish   181 TSTQVKIWFQNRRYKCKRQRQDQ-------TLEMVGIAPPRRI---SVPVL-VRDGKPC 228

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
HHEXNP_650938.2 Homeodomain 200..251 CDD:459649 29/50 (58%)
nkx2.5NP_571496.2 Homeodomain 142..198 CDD:459649 29/55 (53%)

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