DRSC/TRiP Functional Genomics Resources

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Protein Alignment HHEX and vsx1

DIOPT Version :10

Sequence 1:NP_650938.2 Gene:HHEX / 42495 FlyBaseID:FBgn0038852 Length:323 Species:Drosophila melanogaster
Sequence 2:NP_571408.1 Gene:vsx1 / 30598 ZFINID:ZDB-GENE-990415-205 Length:344 Species:Danio rerio


Alignment Length:163 Identity:42/163 - (25%)
Similarity:64/163 - (39%) Gaps:41/163 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly   193 KRKGGQIR--FTSQQTKNLEARFASSKYLSPEERRHLALQLKLTDRQVKTWFQNRRAKWRRAN-- 253
            |||..:.|  |||.|.:.||..|..:.|.....|..||::.:|.:.:::.||||||||||:..  
Zfish   148 KRKKRRHRTVFTSHQLEELEKAFNEAHYPDVYAREMLAMKTELPEDRIQVWFQNRRAKWRKREKC 212

  Fly   254 LSKRSASAQGPIAGAAV---------------------------GSPSSASSSSVPVLNLGSGSR 291
            ..:.|..|:..:.||.|                           |.|:.....|:.::....|:.
Zfish   213 WGRSSVMAEYGLYGAMVRHSIPLPESIINSAKSGMMGSCAPWLLGEPAGMHKKSMEIVKKAPGTP 277

  Fly   292 CGQQSDEEDRMYLSEDDE----------DDDED 314
            ....||.....:..:|.:          ||.||
Zfish   278 ESTHSDTYSEEHKGKDSDTTWSSGANGADDSED 310

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
HHEXNP_650938.2 Homeodomain 200..251 CDD:459649 22/52 (42%)
vsx1NP_571408.1 Octapeptide motif 37..44
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 49..70
COG5576 101..>221 CDD:227863 27/72 (38%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 127..156 3/7 (43%)
Nuclear localization signal. /evidence=ECO:0000269|PubMed:11331779 147..151 2/2 (100%)
Homeodomain 152..208 CDD:459649 22/55 (40%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 273..344 8/38 (21%)
Blue background indicates that the domain is not in the aligned region.

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