Protein Alignment HHEX and msx2b

DIOPT Version :10

• Sequence 1: NP_650938.2
• Gene: HHEX / 42495
• FlyBaseID: FBgn0038852
• Length: 323
• Species: Drosophila melanogaster
• Sequence 2: NP_571351.3
• Gene: msx2b / 30531
• ZFINID: ZDB-GENE-980526-492
• Length: 241
• Species: Danio rerio
• Alignment Length: 287
• Identity: 61/287 - (21%)
• Similarity: 92/287 - (32%)
• Gaps: 109/287 - (37%)

  Fly     5 TKSSKAAFSIENILEQKSSSHRSQSRRGSSQSPVAVTAGIATPHALAMPKASLATGSSSAAPTPS 69
            |:.|...||:|:::....::...:.||....|..|.|....:..:..:||..:...|...:.:|.
Zfish    21 TQVSSHPFSVESLISSHKTNKDFERRREDVSSQFAQTEIRDSCGSAGIPKHFMLQTSPVKSESPE 85

  Fly    70 PSSATNIYDLSREAAAAQYAMKSMDSSAVLAPTSLRFNPIYPDPASLFYQQVLQLQKNPSLFMPH 134
            |...|:....||      |:....:|     |..||.:.....|            :.|
Zfish    86 PDDCTSWVMNSR------YSQTRQES-----PCPLRKHKTNRKP------------RTP------ 121

  Fly   135 FQAAAVAAAAAVQPTAYCDQYSPFTMDCEGFPNPASAAAALYCNAYPAASFYMSNFGVKRKGGQI 199
                                                                             
Zfish   122 ----------------------------------------------------------------- 121

  Fly   200 RFTSQQTKNLEARFASSKYLSPEERRHLALQLKLTDRQVKTWFQNRRAKWRR---ANLSKRSASA 261
             ||:.|...||.:|...:|||..||...:..|.||:.|||.||||||||.:|   |.|.|...:|
Zfish   122 -FTTSQLLALERKFRQKQYLSIAERAEFSSSLTLTETQVKIWFQNRRAKAKRLQEAELEKLKLTA 185

  Fly   262 QGPIAGAAVGSPSSASSSSVPVLNLGS 288
            :          |:...:.|:| |.||:
Zfish   186 K----------PALHPNFSLP-LPLGT 201

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
HHEX	NP_650938.2	Homeodomain	200..251	CDD:459649	25/50 (50%)
msx2b	NP_571351.3	Homeodomain	116..172	CDD:459649	27/139 (19%)