DRSC/TRiP Functional Genomics Resources

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Protein Alignment HHEX and rx2

DIOPT Version :10

Sequence 1:NP_650938.2 Gene:HHEX / 42495 FlyBaseID:FBgn0038852 Length:323 Species:Drosophila melanogaster
Sequence 2:NP_571301.2 Gene:rx2 / 30473 ZFINID:ZDB-GENE-990415-237 Length:327 Species:Danio rerio


Alignment Length:110 Identity:36/110 - (32%)
Similarity:50/110 - (45%) Gaps:19/110 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly   193 KRKGGQIRFTSQQTKNLEARFASSKYLSPEERRHLALQLKLTDRQVKTWFQNRRAKWRRANLSK- 256
            |.:..:..||:.|...||..|..|.|.....|..||:::.|.:.:|:.|||||||||||..... 
Zfish   134 KHRRNRTTFTTYQLHELERAFEKSHYPDVYSREELAMKVNLPEVRVQVWFQNRRAKWRRQEKMDT 198

  Fly   257 ----------RS------ASAQGPIAGAAVGSP--SSASSSSVPV 283
                      ||      |...||::.:....|  ||..||:.|:
Zfish   199 GTMKLHDSPIRSFNRPPMAPNVGPMSNSLPLDPWLSSPLSSATPM 243

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
HHEXNP_650938.2 Homeodomain 200..251 CDD:459649 22/50 (44%)
rx2NP_571301.2 Octapeptide motif 37..44
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 48..73
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 100..139 1/4 (25%)
Homeodomain 136..192 CDD:459649 22/55 (40%)
OAR 302..316 CDD:461067
OAR. /evidence=ECO:0000255|PROSITE-ProRule:PRU00138 304..317
Nuclear localization signal. /evidence=ECO:0000255 310..314
Blue background indicates that the domain is not in the aligned region.

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