DRSC/TRiP Functional Genomics Resources

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Protein Alignment HHEX and hoxb8b

DIOPT Version :10

Sequence 1:NP_650938.2 Gene:HHEX / 42495 FlyBaseID:FBgn0038852 Length:323 Species:Drosophila melanogaster
Sequence 2:NP_571256.1 Gene:hoxb8b / 30420 ZFINID:ZDB-GENE-980526-291 Length:247 Species:Danio rerio


Alignment Length:266 Identity:64/266 - (24%)
Similarity:94/266 - (35%) Gaps:81/266 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly   103 SLRFN----PIY-PD----PASLF-------YQQVLQLQKNPSLF------MPH--FQAAAVAAA 143
            |||.|    |.| ||    |:.|:       :|...|.   |..:      .||  :|....|.|
Zfish    18 SLRSNYYDCPSYTPDLGGRPSVLYGHNTGSAFQHAAQF---PDFYHHGTSSFPHASYQQTPCAVA 79

  Fly   144 AAVQPTA-------------YCDQYSPFTM--DC----EGFPNPASAAAALYCNAYPAASFYMSN 189
            .....|.             :....|.||.  ||    .|..:...:|.......:|    :|..
Zfish    80 YPGDATGNILGQDGLQKQSFFGAPDSDFTQFGDCNLKVSGIRDDLESAEPCTAQLFP----WMRP 140

  Fly   190 FGVKRKGGQIRFTSQQTKNLEARFASSKYLSPEERRHLALQLKLTDRQVKTWFQNRRAKWRRANL 254
            ....|:.|:..::..||..||..|..:.||:.:.|..::..|.||:||||.||||||.||::.:.
Zfish   141 QATGRRRGRQTYSRYQTLELEKEFLFNPYLTRKRRIEVSHALALTERQVKIWFQNRRMKWKKEHN 205

  Fly   255 SKRSASAQGPIAGAAVGSPSSASSSSVPVLNLGSGSRCGQQSDEEDRMYLSEDDE--DDDEDEGE 317
            ..:..|                             |:..|:..|.:|...|:..|  ...|::.|
Zfish   206 KDKFPS-----------------------------SKAEQEEIERERQEGSQVSEKHTSGEEDSE 241

  Fly   318 ADETPK 323
            |....|
Zfish   242 ASSNSK 247

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
HHEXNP_650938.2 Homeodomain 200..251 CDD:459649 23/50 (46%)
hoxb8bNP_571256.1 Antp-type hexapeptide 134..139 1/8 (13%)
Homeodomain 146..202 CDD:459649 24/55 (44%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 201..247 10/74 (14%)

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