Protein Alignment HHEX and hoxc5a

DIOPT Version :10

• Sequence 1: NP_650938.2
• Gene: HHEX / 42495
• FlyBaseID: FBgn0038852
• Length: 323
• Species: Drosophila melanogaster
• Sequence 2: NP_571219.2
• Gene: hoxc5a / 30379
• ZFINID: ZDB-GENE-980526-533
• Length: 233
• Species: Danio rerio
• Alignment Length: 203
• Identity: 52/203 - (25%)
• Similarity: 78/203 - (38%)
• Gaps: 30/203 - (14%)

  Fly    57 LATGSSSAAPTPSPS---SATNIYDLSREAAAAQYAMKSMDSSAVLAPTSL----RFNPIYPDPA 114
            |..|.|.::..|:.|   .|.|..|.:|.:||.|    ...|.:.|...|.    .:||:.....
Zfish    43 LDLGGSFSSQIPTNSLRREAINTTDRARSSAAVQ----RTQSCSALGSRSFVSTHGYNPLSHGLL 103

  Fly   115 SLFYQQVLQLQKNPSLFMPHFQAAAVAAAAAVQPTAYCDQYSPFTMDCEGFPNPASAAAALYCNA 179
            |...:..:::.:.||.............:|..|.|                 |............
Zfish   104 SQKAEGNMEVMEKPSGKSRTDDIKMETTSAIKQQT-----------------NSTQRQNQSQPQI 151

  Fly   180 YP-AASFYMSNFGVKRKGGQIRFTSQQTKNLEARFASSKYLSPEERRHLALQLKLTDRQVKTWFQ 243
            || ....:||:.. ..|..:..:|..||..||..|..::||:...|..:|..|.|.:||:|.|||
Zfish   152 YPWMTKLHMSHES-DGKRSRTSYTRYQTLELEKEFHFNRYLTRRRRIEIANNLCLNERQIKIWFQ 215

  Fly   244 NRRAKWRR 251
            |||.||::
Zfish   216 NRRMKWKK 223

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
HHEX	NP_650938.2	Homeodomain	200..251	CDD:459649	23/50 (46%)
hoxc5a	NP_571219.2	Homeodomain	167..223	CDD:459649	24/55 (44%)