Protein Alignment HHEX and Hoxb3

DIOPT Version :10

• Sequence 1: NP_650938.2
• Gene: HHEX / 42495
• FlyBaseID: FBgn0038852
• Length: 323
• Species: Drosophila melanogaster
• Sequence 2: NP_001100512.1
• Gene: Hoxb3 / 303488
• RGDID: 1310780
• Length: 429
• Species: Rattus norvegicus
• Alignment Length: 302
• Identity: 67/302 - (22%)
• Similarity: 105/302 - (34%)
• Gaps: 99/302 - (32%)

  Fly     9 KAAFSIENILEQKSSSH-RSQSRRGSSQSPVAVTAGIATPHALAMPKASLATGSSSAAPTPSPSS 72
            ::|.|::::  ..::.| :|:...||...|     |:| |..|..|..|   ...|||||.:.|:
  Rat    49 RSACSLQSL--GNAAPHAKSKELNGSCMRP-----GLA-PEPLPAPPGS---PPPSAAPTSTTSN 102

  Fly    73 ATNIYDLSREAAAAQYAMKSMDSSAVLAPTSLRFNPIYPDPASLFYQQVLQLQKNPSLFMPHFQA 137
            :.|....|:.......|..:                      |...:|:....|..
  Rat   103 SNNGGGPSKSGPPKCGASSN----------------------STLTKQIFPWMKES--------- 136

  Fly   138 AAVAAAAAVQPTAYCDQYSPFTMD-CEGFPN-----------------------PASAAAALYCN 178
                     :.|:.....||.|.: |.|...                       |.|||:
  Rat   137 ---------RQTSKLKNSSPGTAEGCGGGGGGGGGGGSSSGGGGSGGGGGDKSPPGSAAS----- 187

  Fly   179 AYPAASFYMSNFGVKRKGGQIRFTSQQTKNLEARFASSKYLSPEERRHLALQLKLTDRQVKTWFQ 243
                            |..:..:||.|...||..|..::||....|..:|..|.|::||:|.|||
  Rat   188 ----------------KRARTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLSERQIKIWFQ 236

  Fly   244 NRRAKWRRANLSKRSASAQGPIAGAAVGSPSSASSSSVPVLN 285
            |||.|:::...:|..||:.|  ..:..|||.....|:...:|
  Rat   237 NRRMKYKKDQKAKGLASSSG--GPSPAGSPPQPMQSTAGFMN 276

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
HHEX	NP_650938.2	Homeodomain	200..251	CDD:459649	22/50 (44%)
Hoxb3	NP_001100512.1	Homeodomain	188..244	CDD:459649	23/55 (42%)
		DUF4074	365..427	CDD:463833