Protein Alignment HHEX and Hoxb13

DIOPT Version :10

• Sequence 1: NP_650938.2
• Gene: HHEX / 42495
• FlyBaseID: FBgn0038852
• Length: 323
• Species: Drosophila melanogaster
• Sequence 2: NP_001100511.1
• Gene: Hoxb13 / 303480
• RGDID: 1309113
• Length: 286
• Species: Rattus norvegicus
• Alignment Length: 250
• Identity: 63/250 - (25%)
• Similarity: 97/250 - (38%)
• Gaps: 54/250 - (21%)

  Fly    43 GIATPHALAMPKASLATGSSSAAPTPSPSSATNIYDLSREAAAAQYAMKSMDSSAVLA------- 100
            |.|.|.....|...:..| :|.||.|........|    ....::.::|....:|.||
  Rat    56 GSAEPPKQCHPCPGVPQG-ASPAPVPYGYFGGGYY----SCRVSRSSLKPCAQTATLATYPSETP 115

  Fly   101 ---------PTSLRFNPIYPDP----ASLFYQQVLQLQKNPSLFMPHFQAAAVAAAAAVQPTAYC 152
                     ||...|.|.||.|    ||.....|:|....|.  .|...        ::.|.
  Rat   116 APGEEYPSRPTEFAFYPGYPGPYQPMASYLDVSVVQTLGAPG--EPRHD--------SLLPV--- 167

  Fly   153 DQYSPFT--------MDCEGFPNPA----SAAAALYCNAYPAASFYMSNFGVKRKGGQIRFTSQQ 205
            |.|.|:.        |.|:|..||.    .||.|.....:|.........|.|::   |.::..|
  Rat   168 DSYQPWALAGGWNSQMCCQGEQNPPGPFWKAAFAEPSVQHPPPDGCAFRRGRKKR---IPYSKGQ 229

  Fly   206 TKNLEARFASSKYLSPEERRHLALQLKLTDRQVKTWFQNRRAKWRRANLSKRSAS 260
            .:.||..:|::|:::.::||.::....|::||:..||||||.|.::. |:|...|
  Rat   230 LRELEREYAANKFITKDKRRKISAATSLSERQITIWFQNRRVKEKKV-LAKVKTS 283

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
HHEX	NP_650938.2	Homeodomain	200..251	CDD:459649	17/50 (34%)
Hoxb13	NP_001100511.1	HoxA13_N	12..124	CDD:463521	14/72 (19%)
		Homeodomain	219..275	CDD:459649	19/58 (33%)