DRSC/TRiP Functional Genomics Resources

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Protein Alignment HHEX and hoxb4a

DIOPT Version :10

Sequence 1:NP_650938.2 Gene:HHEX / 42495 FlyBaseID:FBgn0038852 Length:323 Species:Drosophila melanogaster
Sequence 2:NP_571193.1 Gene:hoxb4a / 30340 ZFINID:ZDB-GENE-990415-105 Length:246 Species:Danio rerio


Alignment Length:291 Identity:69/291 - (23%)
Similarity:99/291 - (34%) Gaps:103/291 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 AFSIENILEQKSSSHRSQSRRGSSQSPVAVTAGIATPHALAMPKASLATGSSSAAPTPSPSSATN 75
            :|..|:|..|:|         |.:..|.:...|...|.|:..|:..:...::.:.|.|.||...:
Zfish    45 SFQHESIYHQRS---------GCADPPYSSCQGPGQPAAVISPRGHVLPTTALSTPLPEPSHHCD 100

  Fly    76 IYDLSREAAAAQYAMKSMDSSAVLAPTSLRFNP-IYPDPASLFYQQVLQLQKNPSLFMPHFQAAA 139
            ....|...|..| ...|.::|.|    |.|.:| :||                   :|.......
Zfish   101 SVTPSPPPACGQ-TPTSQNTSTV----SSRKDPVVYP-------------------WMKKVHVNI 141

  Fly   140 VAAAAAVQPTAYCDQYSPFTMDCEGFPNPASAAAALYCNAYPAASFYMSNFGVKRKGGQIRFTSQ 204
            |:                        ||        |....|             |..:..:|.|
Zfish   142 VS------------------------PN--------YSGGEP-------------KRSRTAYTRQ 161

  Fly   205 QTKNLEARFASSKYLSPEERRHLALQLKLTDRQVKTWFQNRRAKWRR----ANLSKRSASAQGPI 265
            |...||..|..::||:...|..:|..|.|::||:|.||||||.||::    .|...||.||    
Zfish   162 QVLELEKEFHYNRYLTRRRRVEIAHTLCLSERQIKIWFQNRRMKWKKDHKLPNTKIRSNSA---- 222

  Fly   266 AGAAVGSPSSASSSSVPVLNLGSGSRCGQQS 296
                     |.:||..|.|       |..||
Zfish   223 ---------STNSSGCPTL-------CSNQS 237

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
HHEXNP_650938.2 Homeodomain 200..251 CDD:459649 23/50 (46%)
hoxb4aNP_571193.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 23..125 22/93 (24%)
Antp-type hexapeptide 130..135 2/23 (9%)
Homeodomain 152..208 CDD:459649 24/55 (44%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 210..246 13/48 (27%)

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