Protein Alignment HHEX and ind

DIOPT Version :10

• Sequence 1: NP_650938.2
• Gene: HHEX / 42495
• FlyBaseID: FBgn0038852
• Length: 323
• Species: Drosophila melanogaster
• Sequence 2: NP_996087.2
• Gene: ind / 2768974
• FlyBaseID: FBgn0025776
• Length: 320
• Species: Drosophila melanogaster
• Alignment Length: 341
• Identity: 79/341 - (23%)
• Similarity: 129/341 - (37%)
• Gaps: 107/341 - (31%)

  Fly    11 AFSIENILEQKSSSHRSQSRRGS-SQSPVAVTAGIATPHALAMPKASLATGSSSAAPTPSPSSAT 74
            :|.::::|..:.:..:.:.:.|| ..||   ||..|...|..:|         |....|.|:|..
  Fly     4 SFLMDSLLSDRPNLSQKKEKLGSPGGSP---TAAAAVAAAAMLP---------SIPMLPYPASYV 56

  Fly    75 NIYDLS--------------REAAAAQYAMKSMDSSAVLAPTSLRFNP-IYPDPASLF--YQQVL 122
            ..|..|              :.||||        ::|..|..:|:.:| :...|.||:  |.|:.
  Fly    57 GSYLFSLGIQQQQQQQQQQQQHAAAA--------AAAAAAAAALQQHPHVSSSPGSLYHPYAQLF 113

  Fly   123 QLQKNPSLFMPHFQAAAVAAAAAVQPTAYCDQYSPFTMDCEG--------FPNPASAAAALYCNA 179
            ..::..|.| .:::....:...:..|.:   |..|...:..|        .|.|.|     :|.:
  Fly   114 ASKRKSSGF-SNYEGCYPSPPLSANPNS---QQLPPIHNLYGSPVVGGLPLPEPGS-----FCTS 169

  Fly   180 YPAASF-----YMSNF----GVKRK-----------------GGQIR------------------ 200
             |:||.     |.:||    |.:.|                 ||.:.
  Fly   170 -PSASSSASLDYTNNFDEPQGKRFKHESSCSPNSSPLKNHSSGGPVEITPLINDYADSSKRIRTA 233

  Fly   201 FTSQQTKNLEARFASSKYLSPEERRHLALQLKLTDRQVKTWFQNRRAKWRRANLSKRSASAQGPI 265
            |||.|...||..|:.:.|||...|..:|.:|:|:::|||.||||||.|       ::...::.|.
  Fly   234 FTSTQLLELEREFSHNAYLSRLRRIEIANRLRLSEKQVKIWFQNRRVK-------QKKGGSESPT 291

  Fly   266 AGAAVGSPSSASSSSV 281
            ...:..|..|..:|.|
  Fly   292 FNLSTNSNGSPQASPV 307

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
HHEX	NP_650938.2	Homeodomain	200..251	CDD:459649	24/68 (35%)
ind	NP_996087.2	Homeodomain	228..284	CDD:459649	24/62 (39%)