DRSC/TRiP Functional Genomics Resources

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Protein Alignment HHEX and Vax1

DIOPT Version :10

Sequence 1:NP_650938.2 Gene:HHEX / 42495 FlyBaseID:FBgn0038852 Length:323 Species:Drosophila melanogaster
Sequence 2:NP_033527.1 Gene:Vax1 / 22326 MGIID:1277163 Length:338 Species:Mus musculus


Alignment Length:228 Identity:57/228 - (25%)
Similarity:86/228 - (37%) Gaps:74/228 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly   120 QVLQLQKNPSLFMPHFQAAAVAAAAAVQPTAYCDQYSPFTMDCEGFPNPA--SAAAALYCNAYPA 182
            :..::.||     .|.::..:..|....|.|:..:           |..|  .:.|:..||...:
Mouse    17 EAARVSKN-----AHKESREIKGAEGSLPAAFLKE-----------PQGAFSGSGASEDCNKSKS 65

  Fly   183 ASF----YMSNFGVKRKGGQIR-------------------FTSQQTKNLEARFASSKYLSPEER 224
            .|.    |.....|:...|.||                   ||::|...||..|...:|:...||
Mouse    66 NSSADPDYCRRILVRDAKGSIREIILPKGLDLDRPKRTRTSFTAEQLYRLEMEFQRCQYVVGRER 130

  Fly   225 RHLALQLKLTDRQVKTWFQNRRAKWR---------RANLSKRSASA-------QG---------- 263
            ..||.||.|::.|||.||||||.|.:         |:.:|:.:|:.       ||          
Mouse   131 TELARQLNLSETQVKVWFQNRRTKQKKDQGKDSELRSVVSETAATCSVLRLLEQGRLLSPPGLPA 195

  Fly   264 ---PIAGAAVGSPSSASSSSVPVLNLGSGSRCG 293
               |.|..|:|  |:....|:|.  ||:|:..|
Mouse   196 LLPPCATGALG--SALRGPSLPA--LGAGAAAG 224

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
HHEXNP_650938.2 Homeodomain 200..251 CDD:459649 25/78 (32%)
Vax1NP_033527.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..69 12/67 (18%)
Homeodomain 101..157 CDD:459649 24/55 (44%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 239..269
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 318..338
Blue background indicates that the domain is not in the aligned region.

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