DRSC/TRiP Functional Genomics Resources

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Protein Alignment HHEX and Nkx2-1

DIOPT Version :10

Sequence 1:NP_650938.2 Gene:HHEX / 42495 FlyBaseID:FBgn0038852 Length:323 Species:Drosophila melanogaster
Sequence 2:NP_001390509.1 Gene:Nkx2-1 / 21869 MGIID:108067 Length:423 Species:Mus musculus


Alignment Length:313 Identity:77/313 - (24%)
Similarity:107/313 - (34%) Gaps:84/313 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 FSIENILEQKSSSHRSQSRRGSS-QSPVAV-TAGIATPHALAMPKASLATGSSSAAPTPSPSSAT 74
            ||:.:||.....|::.....|.. .:|:|. ..|.|.|.|.||.:.  |.|...|.......:|.
Mouse    62 FSVSDILSPLEESYKKVGMEGGGLGAPLAAYRQGQAAPPAAAMQQH--AVGHHGAVTAAYHMTAA 124

  Fly    75 NIYDLSREAAAAQYAMKSMDSSAVLAPTSLRFNPIYPDPASLFYQQVLQLQKNPSLFMPHFQAAA 139
            .:..||..|... |...::.:.:.|.|                ||..::                
Mouse   125 GVPQLSHSAVGG-YCNGNLGNMSELPP----------------YQDTMR---------------- 156

  Fly   140 VAAAAAVQPTAYCDQYSPFTMDCEGFPNPASAAAALYCNAYPAASFYMSNFG------------- 191
               .:|..|..|           ...|:|...|.:.:..  ||:...||..|             
Mouse   157 ---NSASGPGWY-----------GANPDPRFPAISRFMG--PASGMNMSGMGGLGSLGDVSKNMA 205

  Fly   192 ----VKRKGGQIRFTSQQTKNLEARFASSKYLSPEERRHLALQLKLTDRQVKTWFQNRRAKWRR- 251
                ..|:..::.|:..|...||.||...||||..||.|||..:.||..|||.||||.|.|.:| 
Mouse   206 PLPSAPRRKRRVLFSQAQVYELERRFKQQKYLSAPEREHLASMIHLTPTQVKIWFQNHRYKMKRQ 270

  Fly   252 -----ANLSKRSASAQGPIAGAAVGSPSSASSS-------SVPVLNLGSGSRC 292
                 |....:..|..|...|...|.|....:.       :|||| :..|..|
Mouse   271 AKDKAAQQQLQQDSGGGGGGGGGAGCPQQQQAQQQSPRRVAVPVL-VKDGKPC 322

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
HHEXNP_650938.2 Homeodomain 200..251 CDD:459649 26/50 (52%)
Nkx2-1NP_001390509.1 Homeodomain 213..269 CDD:459649 26/55 (47%)

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