DRSC/TRiP Functional Genomics Resources

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Protein Alignment HHEX and dsc-1

DIOPT Version :10

Sequence 1:NP_650938.2 Gene:HHEX / 42495 FlyBaseID:FBgn0038852 Length:323 Species:Drosophila melanogaster
Sequence 2:NP_510497.1 Gene:dsc-1 / 181599 WormBaseID:WBGene00001096 Length:310 Species:Caenorhabditis elegans


Alignment Length:220 Identity:53/220 - (24%)
Similarity:86/220 - (39%) Gaps:51/220 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly   113 PASLFYQQVLQLQKNPSLFMPHFQA-----AAVAAAAAVQPTAYCDQYSPFTMDCEGFPNPASAA 172
            |||.::...:.|..:..:...|:.:     ..|:..::...|....|.||:  |..|..:|...:
 Worm    70 PASYYHNLGVALHNHFQMSNQHYLSDFDCPTTVSPISSAHETGQLPQLSPY--DHIGNQDPHMFS 132

  Fly   173 AALYCNA-YPAASFY---------------------MSNFGVKRKGGQIR----FTSQQTKNLEA 211
            ...|.|: .|..|::                     ||:...:..||:.|    ||..|:..||.
 Worm   133 PHAYGNSMIPDNSYFENASRSISAPNVGNSTLNPSLMSSDNAQSCGGRRRFRTNFTELQSTFLED 197

  Fly   212 RFASSKYLSPEERRHLALQLKLTDRQVKTWFQNRRAKWRRANLSKRSA----------------- 259
            .|..|.|...:.::::|..||:.:.::..|||||||||||....:|..                 
 Worm   198 SFKESHYPDHKAKKYMADFLKIPEDRITVWFQNRRAKWRRKEHRQRDRTRNESFSGGSNSFDFAC 262

  Fly   260 -SAQGPIAGAAVGSPSSASSSSVPV 283
             |||.|..|.....|:|....:.|:
 Worm   263 FSAQHPDDGPNAKHPNSFGIPNQPM 287

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
HHEXNP_650938.2 Homeodomain 200..251 CDD:459649 21/54 (39%)
dsc-1NP_510497.1 Homeodomain 181..237 CDD:459649 21/55 (38%)

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