DRSC/TRiP Functional Genomics Resources

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Protein Alignment HHEX and ttx-1

DIOPT Version :9

Sequence 1:NP_650938.2 Gene:HHEX / 42495 FlyBaseID:FBgn0038852 Length:323 Species:Drosophila melanogaster
Sequence 2:NP_001024212.1 Gene:ttx-1 / 180313 WormBaseID:WBGene00006652 Length:391 Species:Caenorhabditis elegans


Alignment Length:350 Identity:87/350 - (24%)
Similarity:149/350 - (42%) Gaps:74/350 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 TKSSKAAFSIENILEQKSSSHRSQSRRGSSQSPVAVTAG--IATPHALAMPKASLATGSSSAA-- 65
            |.||..:.||..:::.::.| .|.|..|.:.....:.:|  |.|| :|....||.::||:|:.  
 Worm     4 TSSSAPSDSIVELIQSQNLS-GSGSGTGGNTGSTTMNSGNFIPTP-SLTGTGASQSSGSASSGNF 66

  Fly    66 ---------PTPS------PSSATNIYDLSREAAAAQYAMKSMDSSAVLAPTSLRFNPIYPDPAS 115
                     |:||      |:|:     ||::.|..........::.|             ||:|
 Worm    67 VSPDETDTKPSPSLMDHNDPTSS-----LSQQLAQGATLTSPYSTTTV-------------DPSS 113

  Fly   116 LFYQQVLQLQKNPSLFMPHFQAAAVAAAAAVQPTAYCDQYSPFTMDCEGFPNPASAAAALYCNAY 180
            |::      |.:|..::|:..:|...|||.:  :||.:|.|.:.....|||:...:.:.|..|.|
 Worm   114 LYF------QLSPMSYIPNVSSATTVAAANM--SAYFNQKSAYPTSHLGFPSNVGSHSFLQSNMY 170

  Fly   181 --------PAASF-YMS------NFGVKRKGGQIRFTSQQTKNLEARFASSKYLSPEERRHLALQ 230
                    |.|:. .||      .|..|::..:..||..|.:.||:.|..::|.....|..:|.:
 Worm   171 IPSSLSDCPTATMGSMSWNANQPGFSRKQRRERTTFTRNQLEILESYFVKTRYPDIFMREDMAHK 235

  Fly   231 LKLTDRQVKTWFQNRRAKWRR-----------ANLSKRSASAQGPIAGAAVGSPSSASSSSVPVL 284
            ::|.:.:|:.||:|||||.|:           ...|..:.|..|..:..:.||....||.:....
 Worm   236 IQLPESRVQVWFKNRRAKARQQKKTLAPSNSGVTCSGNNGSTGGGSSNGSTGSEVQPSSPATTDS 300

  Fly   285 NLGSGSRCGQQSDEEDRMYLSEDDE 309
            .|.......::.||:. :..|.||:
 Worm   301 ELKFSEVIKEECDEQS-ISPSADDQ 324

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
HHEXNP_650938.2 Homeobox 200..250 CDD:278475 18/49 (37%)
ttx-1NP_001024212.1 Homeobox 203..256 CDD:365835 18/52 (35%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG28934
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.920

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