Protein Alignment HHEX and lin-39

DIOPT Version :10

• Sequence 1: NP_650938.2
• Gene: HHEX / 42495
• FlyBaseID: FBgn0038852
• Length: 323
• Species: Drosophila melanogaster
• Sequence 2: NP_001021164.1
• Gene: lin-39 / 176068
• WormBaseID: WBGene00003024
• Length: 253
• Species: Caenorhabditis elegans
• Alignment Length: 256
• Identity: 70/256 - (27%)
• Similarity: 96/256 - (37%)
• Gaps: 63/256 - (24%)

  Fly    33 SSQSPVAVTAGIATPHALAMPKASLATGSSSAAPTPSPSSATNIYDLSREAAAAQYAMKSMDSSA 97
            :|.||.:..|    |.|.|...:|.::.|||::.:.|...|:.|...|..::...|  ..|.:||
 Worm     3 TSTSPSSTDA----PRATAPESSSSSSSSSSSSSSTSSVGASGIPSSSELSSTIGY--DPMTASA 61

  Fly    98 VLA--------PTSLR------------FNPIYP--DPASLFYQQVLQLQKNPSLFMPHFQAAAV 140
            .|:        |||..            ..|.||  ...||.|        |||:...|.....:
 Worm    62 ALSAHFGSYYDPTSSSQIASYFASSQGLGGPQYPILGDQSLCY--------NPSVTSTHHDWKHL 118

  Fly   141 AAAAAVQPTAYCDQYSPFTMDCEGF--------PNPASAAAALYCNAYPAASFYMSNFGVKR--K 195
            ..          |.......|.:|.        .|...|       .||..:...|..|..|  |
 Worm   119 EG----------DDDDDKDDDKKGISGDDDDMDKNSGGA-------VYPWMTRVHSTTGGSRGEK 166

  Fly   196 GGQIRFTSQQTKNLEARFASSKYLSPEERRHLALQLKLTDRQVKTWFQNRRAKWRRANLSK 256
            ..:..:|..|...||..|.:.|||:.:.|..:|..|.||:||||.||||||.|.::.|..|
 Worm   167 RQRTAYTRNQVLELEKEFHTHKYLTRKRRIEVAHSLMLTERQVKIWFQNRRMKHKKENKDK 227

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
HHEX	NP_650938.2	Homeodomain	200..251	CDD:459649	24/50 (48%)
lin-39	NP_001021164.1	Homeodomain	166..222	CDD:459649	25/55 (45%)