DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment HHEX and GSX2

DIOPT Version :10

Sequence 1:NP_650938.2 Gene:HHEX / 42495 FlyBaseID:FBgn0038852 Length:323 Species:Drosophila melanogaster
Sequence 2:NP_573574.2 Gene:GSX2 / 170825 HGNCID:24959 Length:304 Species:Homo sapiens


Alignment Length:312 Identity:82/312 - (26%)
Similarity:114/312 - (36%) Gaps:107/312 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly    37 PVAVTAGIATPHALAMPKASLATGSSSAAPTPSPSSATNIYDLSREAAAAQYAMKSMDSSAVLAP 101
            |:.||:     | |...:.|:..||..|....:.:..:.:    ..||.|...:|...||   ||
Human    62 PLCVTS-----H-LHSSRGSVGAGSGGAGAGVTGAGGSGV----AGAAGALPLLKGQFSS---AP 113

  Fly   102 TSLRFNP--------IYPDPASLFYQQVLQLQKNPSLFMPHFQAAAVAAAAAVQPTAYCDQYSPF 158
            ...:|.|        .:|......:.|..|         |...|||.|||||             
Human   114 GDAQFCPRVNHAHHHHHPPQHHHHHHQPQQ---------PGSAAAAAAAAAA------------- 156

  Fly   159 TMDCEGFPNPASAAAAL--------YCNA--YPAAS---FYMSNFGVK-----RKGGQIR--FTS 203
                      |:|||||        .|.|  |..|.   |:....|..     ..|.::|  |||
Human   157 ----------AAAAAALGHPQHHAPVCTATTYNVADPRRFHCLTMGGSDASQVPNGKRMRTAFTS 211

  Fly   204 QQTKNLEARFASSKYLSPEERRHLALQLKLTDRQVKTWFQNRRAKWRRANLSKRSASAQGPIAGA 268
            .|...||..|:|:.|||...|..:|..|.|:::|||.||||||.|.::.....:.          
Human   212 TQLLELEREFSSNMYLSRLRRIEIATYLNLSEKQVKIWFQNRRVKHKKEGKGTQR---------- 266

  Fly   269 AVGSPSSASSSSVPVLNLGSGSRC-GQQ-----SDEEDRMYLSEDDEDDDED 314
                            |..:|.:| |.|     |::||.  ||....:||::
Human   267 ----------------NSHAGCKCVGSQVHYARSEDEDS--LSPASANDDKE 300

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
HHEXNP_650938.2 Homeodomain 200..251 CDD:459649 26/52 (50%)
GSX2NP_573574.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 116..151 8/43 (19%)
Homeodomain 203..259 CDD:459649 26/55 (47%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 283..304 7/20 (35%)

Return to query results.
Submit another query.