DRSC/TRiP Functional Genomics Resources

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Protein Alignment HHEX and Hoxd12

DIOPT Version :10

Sequence 1:NP_650938.2 Gene:HHEX / 42495 FlyBaseID:FBgn0038852 Length:323 Species:Drosophila melanogaster
Sequence 2:NP_032300.2 Gene:Hoxd12 / 15432 MGIID:96204 Length:268 Species:Mus musculus


Alignment Length:266 Identity:60/266 - (22%)
Similarity:101/266 - (37%) Gaps:58/266 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    18 LEQKSSSHRSQSRRGSSQSPVAVTAGIATPHALAMPKASLATGSSSAAPTPS-PSSATNIYDLSR 81
            |:...|.:.|..|...||        :|....::.|:::|...::.|:.||: |::|:.....|:
Mouse    18 LQSPDSFYFSNLRANGSQ--------LAALPPISYPRSALPWATTPASCTPAQPATASAFGGFSQ 74

  Fly    82 EAAAAQYAMKSMDSSAVLAPTSLRFNPIYPDPASLFYQQVLQLQKNPSLFMPHFQAAAVAAAAAV 146
            ........:......|...|         .|....:........:..|...|.|...:....:|:
Mouse    75 PYLTGSGPIGLQSPGAKDGP---------EDQVKFYTPDAPTASEERSRTRPPFAPESSLVHSAL 130

  Fly   147 QPTAYCDQYSPFTMDCEGFPNPASAAAALYCNAYPAASFYMS-------NFGVKRKG-------- 196
            :.|.|         |..|....|..:|.|...|..|:||...       |..|:..|        
Mouse   131 KGTKY---------DYAGVGRTAPGSATLLQGAPCASSFKEDTKGPLNLNMAVQVAGVASCLRSS 186

  Fly   197 -----------GQIR-----FTSQQTKNLEARFASSKYLSPEERRHLALQLKLTDRQVKTWFQNR 245
                       |:.|     :|.||...||..|..:::::.::|:.|:.:|.|:|:|||.|||||
Mouse   187 LPDGLPWGAAPGRARKKRKPYTKQQIAELENEFLVNEFINRQKRKELSNRLNLSDQQVKIWFQNR 251

  Fly   246 RAKWRR 251
            |.|.:|
Mouse   252 RMKKKR 257

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
HHEXNP_650938.2 Homeodomain 200..251 CDD:459649 22/55 (40%)
Hoxd12NP_032300.2 PHA03247 <37..123 CDD:223021 15/94 (16%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 102..124 3/21 (14%)
Homeodomain 201..257 CDD:459649 22/55 (40%)

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