DRSC/TRiP Functional Genomics Resources

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Protein Alignment HHEX and Hoxb4

DIOPT Version :10

Sequence 1:NP_650938.2 Gene:HHEX / 42495 FlyBaseID:FBgn0038852 Length:323 Species:Drosophila melanogaster
Sequence 2:NP_034589.3 Gene:Hoxb4 / 15412 MGIID:96185 Length:250 Species:Mus musculus


Alignment Length:259 Identity:61/259 - (23%)
Similarity:92/259 - (35%) Gaps:104/259 - (40%)


- Green bases have known domain annotations that are detailed below.


  Fly    33 SSQSPVAVTAGIATPHALAMPKASLATGSSSAAPTPSPSSATNIYDLSREAAAAQYAMKSMDSSA 97
            |.::||..|||     || :|:....:.:.|::|.|.|              .||          
Mouse    89 SPRAPVQPTAG-----AL-LPEPGQRSEAVSSSPPPPP--------------CAQ---------- 123

  Fly    98 VLAPTSLRFNPIYPDPASLFYQQVLQLQKNPSLFMPHFQAAAVAAAAAVQPTAYCDQYSPF---- 158
                     ||::|.|:.                           :|..:|..|     |:    
Mouse   124 ---------NPLHPSPSH---------------------------SACKEPVVY-----PWMRKV 147

  Fly   159 ---TMDCEGFPNPASAAAALYCNAYPAASFYMSNFGVKRKGGQIRFTSQQTKNLEARFASSKYLS 220
               |::    ||.|                     |.:.|..:..:|.||...||..|..::||:
Mouse   148 HVSTVN----PNYA---------------------GGEPKRSRTAYTRQQVLELEKEFHYNRYLT 187

  Fly   221 PEERRHLALQLKLTDRQVKTWFQNRRAKWRRANLSKRSASAQGPIAGAAVGSPSSASSSSVPVL 284
            ...|..:|..|.|::||:|.||||||.||::.:....:....|..|||| |.|....:...|.|
Mouse   188 RRRRVEIAHALCLSERQIKIWFQNRRMKWKKDHKLPNTKIRSGGTAGAA-GGPPGRPNGGPPAL 250

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
HHEXNP_650938.2 Homeodomain 200..251 CDD:459649 23/50 (46%)
Hoxb4NP_034589.3 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..133 19/109 (17%)
Antp-type hexapeptide 140..145 2/9 (22%)
Homeodomain 162..218 CDD:459649 24/55 (44%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 219..250 8/31 (26%)

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