DRSC/TRiP Functional Genomics Resources

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Protein Alignment HHEX and alx4

DIOPT Version :10

Sequence 1:NP_650938.2 Gene:HHEX / 42495 FlyBaseID:FBgn0038852 Length:323 Species:Drosophila melanogaster
Sequence 2:XP_004913406.1 Gene:alx4 / 100493396 XenbaseID:XB-GENE-853003 Length:376 Species:Xenopus tropicalis


Alignment Length:156 Identity:48/156 - (30%)
Similarity:60/156 - (38%) Gaps:54/156 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly   188 SNFGVKRKGGQIRFTSQQTKNLEARFASSKYLSPEERRHLALQLKLTDRQVKTWFQNRRAKWR-- 250
            ||.|.||: .:..|||.|.:.||..|..:.|.....|..||::..||:.:|:.||||||||||  
 Frog   176 SNKGKKRR-NRTTFTSYQLEELEKVFQKTHYPDVYAREQLAMRTDLTEARVQVWFQNRRAKWRKR 239

  Fly   251 ---------RANLS-----------KRSASAQGP--IAGAAVGSP-----------SSASSS--- 279
                     |.:.|           :..|..|.|  |.....|||           ||..|.   
 Frog   240 ERFGQMQQVRTHFSSAYELPLLTRAENYAQIQNPSWIGNNGGGSPVPACVVPCDTVSSCMSPHSH 304

  Fly   280 -----------SVPVLNLGSGSRCGQ 294
                       |||    |.|:..||
 Frog   305 PHSAGGVSEFLSVP----GPGAHVGQ 326

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
HHEXNP_650938.2 Homeodomain 200..251 CDD:459649 24/61 (39%)
alx4XP_004913406.1 COG5576 120..266 CDD:227863 31/90 (34%)
Homeodomain 182..238 CDD:459649 24/56 (43%)
OAR 352..370 CDD:461067
Blue background indicates that the domain is not in the aligned region.

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