DRSC/TRiP Functional Genomics Resources

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Protein Alignment HHEX and barx1

DIOPT Version :10

Sequence 1:NP_650938.2 Gene:HHEX / 42495 FlyBaseID:FBgn0038852 Length:323 Species:Drosophila melanogaster
Sequence 2:XP_004914882.1 Gene:barx1 / 100491751 XenbaseID:XB-GENE-919916 Length:253 Species:Xenopus tropicalis


Alignment Length:225 Identity:55/225 - (24%)
Similarity:84/225 - (37%) Gaps:57/225 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly   115 SLFYQQVLQLQKNPSLFMPHFQAAAVAAAAAVQPTAY--------CDQYSPF-----TMDCEGFP 166
            |...:::|...::|....|..:.......|.:....|        .:|.|.|     .:.|....
 Frog    27 SFMIEEILTDHQDPKASPPAGELLKFGVQALLSARPYHNHLALLKAEQASVFKFPLSPLSCPALG 91

  Fly   167 NPASAA--AA-----------------LYCNAYPAASFYMSNFGVKRKGGQIR--FTSQQTKNLE 210
            :|.|:|  ||                 |:......:|.........:||.:.|  ||..|...||
 Frog    92 SPISSALLAAGSGLQGGPGTPHHLPLELHLRGKLESSVSEQGGSKAKKGRRSRTVFTELQLMGLE 156

  Fly   211 ARFASSKYLSPEERRHLALQLKLTDRQVKTWFQNRRAKWRRANLSKRSASAQGPIAGAAVGSPSS 275
            .||...||||..:|..||..|.|:..|||||:||||.||::..:          :.|..:.||:.
 Frog   157 KRFEKQKYLSTPDRIDLAESLGLSQLQVKTWYQNRRMKWKKIQV----------LQGGGLESPTK 211

  Fly   276 ----ASSSSVPVLNLGSGSRCGQQSDEEDR 301
                ...:|:|         ..:|..|::|
 Frog   212 PKGRPKKNSIP---------SSEQLTEQER 232

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
HHEXNP_650938.2 Homeodomain 200..251 CDD:459649 28/52 (54%)
barx1XP_004914882.1 Homeodomain 141..197 CDD:459649 28/55 (51%)

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