Protein Alignment HHEX and hoxc12

DIOPT Version :10

• Sequence 1: NP_650938.2
• Gene: HHEX / 42495
• FlyBaseID: FBgn0038852
• Length: 323
• Species: Drosophila melanogaster
• Sequence 2: XP_002936693.1
• Gene: hoxc12 / 100487557
• XenbaseID: XB-GENE-853677
• Length: 263
• Species: Xenopus tropicalis
• Alignment Length: 225
• Identity: 57/225 - (25%)
• Similarity: 98/225 - (43%)
• Gaps: 30/225 - (13%)

  Fly    51 AMPKASLATGSSSAAPTPSPSSATNI-------YDLSREAAAAQYAMKSMDSSAVLAPTSLRFNP 108
            ::|.||  |...:..|.|..||..:|       .||:|......|..:..:..   .|:..|.|.
 Frog    52 SLPWAS--TEPCNGYPQPYLSSPVSINPSFSRACDLARVEETKCYYREGCNPD---TPSLKRENV 111

  Fly   109 IYPDPASLFYQQVLQLQKNPSLFMPHFQAAAVAAAAAVQPTAY-CDQYSPFTMDCEGFPNPASAA 172
            :.|..:.:........||        :...||.:.....|:.. .:..|..::..||..|..|.|
 Frog   112 LLPLESGIHSAMNSTFQK--------YDYTAVDSVPHDPPSCQSLESDSGSSLLNEGTKNAVSEA 168

  Fly   173 AALYC-----NAYPA--ASFYMSNFGVKRKGGQIRFTSQQTKNLEARFASSKYLSPEERRHLALQ 230
            |.:..     |:.||  |.:|..:...::|  :..::..|...||..|..:::::.:.||.|:.:
 Frog   169 ATMASPSNPGNSLPASGAPWYPIHTRSRKK--RKPYSKIQLAELEGEFMVNEFITRQRRRELSDR 231

  Fly   231 LKLTDRQVKTWFQNRRAKWRRANLSKRSAS 260
            |.|:|:|||.||||||.|.:|..:.:::.|
 Frog   232 LSLSDQQVKIWFQNRRMKKKRLLMREQALS 261

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
HHEX	NP_650938.2	Homeodomain	200..251	CDD:459649	20/50 (40%)
hoxc12	XP_002936693.1	Homeodomain	196..252	CDD:459649	21/57 (37%)