DRSC/TRiP Functional Genomics Resources

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Protein Alignment HHEX and nkx2-3

DIOPT Version :10

Sequence 1:NP_650938.2 Gene:HHEX / 42495 FlyBaseID:FBgn0038852 Length:323 Species:Drosophila melanogaster
Sequence 2:XP_002937234.1 Gene:nkx2-3 / 100486189 XenbaseID:XB-GENE-852996 Length:328 Species:Xenopus tropicalis


Alignment Length:107 Identity:42/107 - (39%)
Similarity:52/107 - (48%) Gaps:15/107 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly   194 RKGGQIRFTSQQTKNLEARFASSKYLSPEERRHLALQLKLTDRQVKTWFQNRRAKWRRANLSKRS 258
            |:..::.|:..|...||.||...:|||..||.|||..||||..|||.||||||.|.:|....|  
 Frog   146 RRKPRVLFSQAQVFELERRFKQQRYLSAPEREHLANSLKLTSTQVKIWFQNRRYKCKRQRQDK-- 208

  Fly   259 ASAQGPIAGAAVGS--PSSASSSSVPVLNLGSGSRC--GQQS 296
                    ...:|:  |......:|||| :..|..|  |.||
 Frog   209 --------SLEMGTHHPPPPRRVAVPVL-VRDGKPCIGGSQS 241

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
HHEXNP_650938.2 Homeodomain 200..251 CDD:459649 28/50 (56%)
nkx2-3XP_002937234.1 Homeodomain 147..203 CDD:459649 28/55 (51%)

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